Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDKN2DP55273 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CDKN2DP55273 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDKN2DP55273 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
CDKN2DP55273 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.43■□□□□ 0.38
CDKN2DP55273 AC005332.1-201ENST00000577698 1310 ntBASIC17.43■□□□□ 0.38
CDKN2DP55273 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.43■□□□□ 0.38
CDKN2DP55273 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDKN2DP55273 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.42■□□□□ 0.38
CDKN2DP55273 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKN2DP55273 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.42■□□□□ 0.38
CDKN2DP55273 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKN2DP55273 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKN2DP55273 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDKN2DP55273 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKN2DP55273 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDKN2DP55273 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.42■□□□□ 0.38
CDKN2DP55273 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKN2DP55273 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CDKN2DP55273 AC125634.1-201ENST00000438758 1403 ntBASIC17.42■□□□□ 0.38
CDKN2DP55273 AC009053.2-201ENST00000563701 2365 ntBASIC17.42■□□□□ 0.38
CDKN2DP55273 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKN2DP55273 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKN2DP55273 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.42■□□□□ 0.38
CDKN2DP55273 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.42■□□□□ 0.38
CDKN2DP55273 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.42■□□□□ 0.38
CDKN2DP55273 KRT8P26-201ENST00000534154 1276 ntBASIC17.42■□□□□ 0.38
CDKN2DP55273 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.42■□□□□ 0.38
CDKN2DP55273 IGHV3-41-201ENST00000613121 348 ntBASIC17.42■□□□□ 0.38
CDKN2DP55273 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKN2DP55273 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.42■□□□□ 0.38
CDKN2DP55273 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.42■□□□□ 0.38
CDKN2DP55273 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKN2DP55273 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
CDKN2DP55273 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDKN2DP55273 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.42■□□□□ 0.38
CDKN2DP55273 PRORSD1P-202ENST00000563365 2154 ntBASIC17.42■□□□□ 0.38
CDKN2DP55273 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.42■□□□□ 0.38
CDKN2DP55273 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDKN2DP55273 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDKN2DP55273 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKN2DP55273 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDKN2DP55273 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDKN2DP55273 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDKN2DP55273 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKN2DP55273 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKN2DP55273 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDKN2DP55273 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKN2DP55273 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKN2DP55273 FAM86EP-206ENST00000510506 987 ntBASIC17.41■□□□□ 0.38
CDKN2DP55273 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKN2DP55273 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKN2DP55273 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.41■□□□□ 0.38
CDKN2DP55273 AC090616.6-201ENST00000582640 721 ntBASIC17.41■□□□□ 0.38
CDKN2DP55273 AL139327.4-201ENST00000612362 153 ntBASIC17.41■□□□□ 0.38
CDKN2DP55273 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.41■□□□□ 0.38
CDKN2DP55273 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.41■□□□□ 0.38
CDKN2DP55273 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDKN2DP55273 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.41■□□□□ 0.38
CDKN2DP55273 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDKN2DP55273 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDKN2DP55273 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKN2DP55273 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDKN2DP55273 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.4■□□□□ 0.38
CDKN2DP55273 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKN2DP55273 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKN2DP55273 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKN2DP55273 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.4■□□□□ 0.38
CDKN2DP55273 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKN2DP55273 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.4■□□□□ 0.38
CDKN2DP55273 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDKN2DP55273 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKN2DP55273 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.4■□□□□ 0.38
CDKN2DP55273 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKN2DP55273 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.4■□□□□ 0.38
CDKN2DP55273 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKN2DP55273 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.4■□□□□ 0.38
CDKN2DP55273 FAM210CP-201ENST00000445714 574 ntBASIC17.4■□□□□ 0.38
CDKN2DP55273 AC091607.1-201ENST00000490318 1060 ntBASIC17.4■□□□□ 0.38
CDKN2DP55273 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.4■□□□□ 0.38
CDKN2DP55273 AL138831.2-201ENST00000606564 490 ntBASIC17.4■□□□□ 0.38
CDKN2DP55273 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CDKN2DP55273 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKN2DP55273 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKN2DP55273 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.4■□□□□ 0.38
CDKN2DP55273 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKN2DP55273 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKN2DP55273 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.4■□□□□ 0.38
CDKN2DP55273 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKN2DP55273 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CDKN2DP55273 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
CDKN2DP55273 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CDKN2DP55273 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDKN2DP55273 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKN2DP55273 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKN2DP55273 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKN2DP55273 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKN2DP55273 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKN2DP55273 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKN2DP55273 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms