Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGA2P52926 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGA2P52926 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGA2P52926 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.1■□□□□ 0.17
HMGA2P52926 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.1■□□□□ 0.17
HMGA2P52926 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.1■□□□□ 0.17
HMGA2P52926 UBALD1-205ENST00000590891 2641 ntBASIC16.1■□□□□ 0.17
HMGA2P52926 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGA2P52926 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGA2P52926 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HMGA2P52926 MMP23A-201ENST00000234610 1017 ntBASIC16.1■□□□□ 0.17
HMGA2P52926 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGA2P52926 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
HMGA2P52926 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGA2P52926 HLA-F-220ENST00000434407 884 ntBASIC16.1■□□□□ 0.17
HMGA2P52926 KRT18P48-201ENST00000434763 852 ntBASIC16.1■□□□□ 0.17
HMGA2P52926 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.1■□□□□ 0.17
HMGA2P52926 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.1■□□□□ 0.17
HMGA2P52926 RASA4DP-201ENST00000460726 1199 ntBASIC16.1■□□□□ 0.17
HMGA2P52926 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.1■□□□□ 0.17
HMGA2P52926 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HMGA2P52926 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HMGA2P52926 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.1■□□□□ 0.17
HMGA2P52926 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HMGA2P52926 AL136038.4-201ENST00000603606 1261 ntBASIC16.1■□□□□ 0.17
HMGA2P52926 AL138966.2-201ENST00000621997 464 ntBASIC16.1■□□□□ 0.17
HMGA2P52926 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.1■□□□□ 0.17
HMGA2P52926 AC141257.4-201ENST00000634557 245 ntBASIC16.1■□□□□ 0.17
HMGA2P52926 AC136944.6-201ENST00000634818 245 ntBASIC16.1■□□□□ 0.17
HMGA2P52926 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.1■□□□□ 0.17
HMGA2P52926 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGA2P52926 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HMGA2P52926 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGA2P52926 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGA2P52926 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGA2P52926 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HMGA2P52926 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.1■□□□□ 0.17
HMGA2P52926 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HMGA2P52926 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
HMGA2P52926 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.09■□□□□ 0.17
HMGA2P52926 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.09■□□□□ 0.17
HMGA2P52926 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.09■□□□□ 0.17
HMGA2P52926 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HMGA2P52926 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 AC068472.1-201ENST00000474589 881 ntBASIC16.09■□□□□ 0.17
HMGA2P52926 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.09■□□□□ 0.17
HMGA2P52926 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
HMGA2P52926 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.09■□□□□ 0.17
HMGA2P52926 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
HMGA2P52926 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.09■□□□□ 0.17
HMGA2P52926 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.09■□□□□ 0.17
HMGA2P52926 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HMGA2P52926 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.09■□□□□ 0.17
HMGA2P52926 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.09■□□□□ 0.17
HMGA2P52926 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.09■□□□□ 0.17
HMGA2P52926 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.09■□□□□ 0.17
HMGA2P52926 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGA2P52926 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
HMGA2P52926 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HMGA2P52926 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.08■□□□□ 0.17
HMGA2P52926 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
HMGA2P52926 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
HMGA2P52926 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HMGA2P52926 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HMGA2P52926 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HMGA2P52926 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.08■□□□□ 0.17
HMGA2P52926 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGA2P52926 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
HMGA2P52926 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGA2P52926 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGA2P52926 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
HMGA2P52926 COX5BP2-201ENST00000392354 334 ntBASIC16.08■□□□□ 0.16
HMGA2P52926 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.08■□□□□ 0.16
HMGA2P52926 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.08■□□□□ 0.16
HMGA2P52926 MTCL1P1-201ENST00000446207 792 ntBASIC16.08■□□□□ 0.16
HMGA2P52926 TSPY15P-201ENST00000457163 923 ntBASIC16.08■□□□□ 0.16
HMGA2P52926 SNORA78-201ENST00000459373 127 ntBASIC16.08■□□□□ 0.16
HMGA2P52926 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HMGA2P52926 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms