Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.79■□□□□ 0.6
CLCNKBP51801 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.79■□□□□ 0.6
CLCNKBP51801 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCNKBP51801 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCNKBP51801 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.79■□□□□ 0.6
CLCNKBP51801 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCNKBP51801 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.79■□□□□ 0.6
CLCNKBP51801 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCNKBP51801 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.79■□□□□ 0.6
CLCNKBP51801 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCNKBP51801 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CLCNKBP51801 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCNKBP51801 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCNKBP51801 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCNKBP51801 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCNKBP51801 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLCNKBP51801 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCNKBP51801 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCNKBP51801 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.79■□□□□ 0.6
CLCNKBP51801 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CLCNKBP51801 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCNKBP51801 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCNKBP51801 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCNKBP51801 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CLCNKBP51801 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCNKBP51801 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCNKBP51801 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCNKBP51801 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCNKBP51801 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCNKBP51801 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCNKBP51801 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLCNKBP51801 PMS2P7-201ENST00000506558 1336 ntBASIC18.78■□□□□ 0.6
CLCNKBP51801 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLCNKBP51801 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCNKBP51801 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CLCNKBP51801 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLCNKBP51801 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCNKBP51801 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.78■□□□□ 0.6
CLCNKBP51801 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCNKBP51801 NCF1C-201ENST00000438382 1427 ntBASIC18.78■□□□□ 0.6
CLCNKBP51801 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCNKBP51801 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.78■□□□□ 0.6
CLCNKBP51801 AC005104.2-201ENST00000427818 678 ntBASIC18.78■□□□□ 0.6
CLCNKBP51801 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.78■□□□□ 0.6
CLCNKBP51801 AC136632.2-201ENST00000512891 861 ntBASIC18.78■□□□□ 0.6
CLCNKBP51801 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCNKBP51801 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.78■□□□□ 0.6
CLCNKBP51801 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.78■□□□□ 0.6
CLCNKBP51801 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCNKBP51801 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.78■□□□□ 0.6
CLCNKBP51801 AC140113.2-201ENST00000604370 208 ntBASIC18.78■□□□□ 0.6
CLCNKBP51801 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLCNKBP51801 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCNKBP51801 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCNKBP51801 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCNKBP51801 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
CLCNKBP51801 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCNKBP51801 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLCNKBP51801 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.77■□□□□ 0.6
CLCNKBP51801 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.77■□□□□ 0.6
CLCNKBP51801 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCNKBP51801 AC006504.4-201ENST00000592118 1568 ntBASIC18.77■□□□□ 0.6
CLCNKBP51801 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCNKBP51801 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CLCNKBP51801 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLCNKBP51801 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CLCNKBP51801 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CLCNKBP51801 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.77■□□□□ 0.6
CLCNKBP51801 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCNKBP51801 AC009947.1-201ENST00000444350 727 ntBASIC18.77■□□□□ 0.6
CLCNKBP51801 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.77■□□□□ 0.6
CLCNKBP51801 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CLCNKBP51801 AC027601.4-201ENST00000611259 610 ntBASIC18.77■□□□□ 0.6
CLCNKBP51801 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.77■□□□□ 0.6
CLCNKBP51801 AC005593.1-201ENST00000624894 515 ntBASIC18.77■□□□□ 0.6
CLCNKBP51801 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.77■□□□□ 0.6
CLCNKBP51801 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLCNKBP51801 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CLCNKBP51801 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CLCNKBP51801 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCNKBP51801 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.77■□□□□ 0.6
CLCNKBP51801 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.77■□□□□ 0.6
CLCNKBP51801 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.77■□□□□ 0.6
CLCNKBP51801 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCNKBP51801 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLCNKBP51801 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CLCNKBP51801 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CLCNKBP51801 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCNKBP51801 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCNKBP51801 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCNKBP51801 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCNKBP51801 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCNKBP51801 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCNKBP51801 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCNKBP51801 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCNKBP51801 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
CLCNKBP51801 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.76■□□□□ 0.59
CLCNKBP51801 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCNKBP51801 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCNKBP51801 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms