Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.88■□□□□ 0.93
TNNI2P48788 ALG1L5P-201ENST00000482043 771 ntBASIC20.88■□□□□ 0.93
TNNI2P48788 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.88■□□□□ 0.93
TNNI2P48788 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.88■□□□□ 0.93
TNNI2P48788 IGHV3-52-201ENST00000519770 353 ntBASIC20.88■□□□□ 0.93
TNNI2P48788 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNNI2P48788 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.88■□□□□ 0.93
TNNI2P48788 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.88■□□□□ 0.93
TNNI2P48788 AC018845.2-201ENST00000568326 409 ntBASIC20.88■□□□□ 0.93
TNNI2P48788 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.88■□□□□ 0.93
TNNI2P48788 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.88■□□□□ 0.93
TNNI2P48788 AC019129.2-201ENST00000609837 1235 ntBASIC20.88■□□□□ 0.93
TNNI2P48788 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNNI2P48788 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
TNNI2P48788 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.88■□□□□ 0.93
TNNI2P48788 BX276092.7-203ENST00000637198 1536 ntBASIC20.88■□□□□ 0.93
TNNI2P48788 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNNI2P48788 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TNNI2P48788 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNNI2P48788 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.87■□□□□ 0.93
TNNI2P48788 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TNNI2P48788 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
TNNI2P48788 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI2P48788 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI2P48788 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI2P48788 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.87■□□□□ 0.93
TNNI2P48788 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI2P48788 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI2P48788 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI2P48788 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TNNI2P48788 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI2P48788 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TNNI2P48788 MKNK2P1-201ENST00000437526 628 ntBASIC20.87■□□□□ 0.93
TNNI2P48788 METTL21AP1-201ENST00000438852 635 ntBASIC20.87■□□□□ 0.93
TNNI2P48788 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.87■□□□□ 0.93
TNNI2P48788 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.87■□□□□ 0.93
TNNI2P48788 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
TNNI2P48788 AL805961.1-202ENST00000641562 540 ntBASIC20.87■□□□□ 0.93
TNNI2P48788 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.87■□□□□ 0.93
TNNI2P48788 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
TNNI2P48788 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI2P48788 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI2P48788 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI2P48788 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.87■□□□□ 0.93
TNNI2P48788 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.87■□□□□ 0.93
TNNI2P48788 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.87■□□□□ 0.93
TNNI2P48788 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI2P48788 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TNNI2P48788 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TNNI2P48788 AL020996.1-203ENST00000536896 2307 ntBASIC20.87■□□□□ 0.93
TNNI2P48788 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.87■□□□□ 0.93
TNNI2P48788 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI2P48788 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.87■□□□□ 0.93
TNNI2P48788 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI2P48788 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNNI2P48788 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
TNNI2P48788 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNNI2P48788 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TNNI2P48788 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNNI2P48788 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TNNI2P48788 MRPL20P1-201ENST00000400819 433 ntBASIC20.86■□□□□ 0.93
TNNI2P48788 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
TNNI2P48788 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.86■□□□□ 0.93
TNNI2P48788 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
TNNI2P48788 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.86■□□□□ 0.93
TNNI2P48788 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.86■□□□□ 0.93
TNNI2P48788 AC010654.1-201ENST00000615722 808 ntBASIC20.86■□□□□ 0.93
TNNI2P48788 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TNNI2P48788 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.86■□□□□ 0.93
TNNI2P48788 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TNNI2P48788 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNNI2P48788 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNNI2P48788 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNNI2P48788 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNNI2P48788 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNNI2P48788 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNNI2P48788 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.85■□□□□ 0.93
TNNI2P48788 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNNI2P48788 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNNI2P48788 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNNI2P48788 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
TNNI2P48788 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.85■□□□□ 0.93
TNNI2P48788 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNNI2P48788 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNNI2P48788 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.85■□□□□ 0.93
TNNI2P48788 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNNI2P48788 AL096828.2-201ENST00000567259 1965 ntBASIC20.85■□□□□ 0.93
TNNI2P48788 HCG11-201ENST00000411553 5696 ntBASIC20.85■□□□□ 0.93
TNNI2P48788 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
TNNI2P48788 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNNI2P48788 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TNNI2P48788 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNNI2P48788 HTR5BP-201ENST00000430851 1154 ntBASIC20.85■□□□□ 0.93
TNNI2P48788 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.85■□□□□ 0.93
TNNI2P48788 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
TNNI2P48788 STK25P1-201ENST00000585406 838 ntBASIC20.85■□□□□ 0.93
TNNI2P48788 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.85■□□□□ 0.93
TNNI2P48788 AL513190.1-201ENST00000621254 727 ntBASIC20.85■□□□□ 0.93
TNNI2P48788 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNNI2P48788 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms