Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.37■□□□□ 0.53
MMP13P45452 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
MMP13P45452 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP13P45452 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
MMP13P45452 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP13P45452 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP13P45452 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
MMP13P45452 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP13P45452 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP13P45452 AL355312.1-201ENST00000407115 2176 ntBASIC18.37■□□□□ 0.53
MMP13P45452 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP13P45452 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
MMP13P45452 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.36■□□□□ 0.53
MMP13P45452 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MMP13P45452 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MMP13P45452 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP13P45452 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP13P45452 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP13P45452 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP13P45452 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP13P45452 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MMP13P45452 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.36■□□□□ 0.53
MMP13P45452 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
MMP13P45452 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.36■□□□□ 0.53
MMP13P45452 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
MMP13P45452 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.36■□□□□ 0.53
MMP13P45452 PCED1CP-201ENST00000419887 785 ntBASIC18.36■□□□□ 0.53
MMP13P45452 KRT18P65-201ENST00000439811 1286 ntBASIC18.36■□□□□ 0.53
MMP13P45452 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.36■□□□□ 0.53
MMP13P45452 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
MMP13P45452 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
MMP13P45452 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP13P45452 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.36■□□□□ 0.53
MMP13P45452 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.36■□□□□ 0.53
MMP13P45452 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.36■□□□□ 0.53
MMP13P45452 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.36■□□□□ 0.53
MMP13P45452 AL138688.1-201ENST00000624851 1594 ntBASIC18.36■□□□□ 0.53
MMP13P45452 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
MMP13P45452 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP13P45452 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
MMP13P45452 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP13P45452 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP13P45452 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP13P45452 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP13P45452 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.35■□□□□ 0.53
MMP13P45452 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
MMP13P45452 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MMP13P45452 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.35■□□□□ 0.53
MMP13P45452 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MMP13P45452 AL139384.1-201ENST00000612143 3047 ntBASIC18.35■□□□□ 0.53
MMP13P45452 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.35■□□□□ 0.53
MMP13P45452 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP13P45452 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP13P45452 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP13P45452 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
MMP13P45452 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP13P45452 TSPY22P-201ENST00000427496 604 ntBASIC18.35■□□□□ 0.53
MMP13P45452 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP13P45452 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MMP13P45452 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
MMP13P45452 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP13P45452 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP13P45452 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP13P45452 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MMP13P45452 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP13P45452 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
MMP13P45452 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP13P45452 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.35■□□□□ 0.53
MMP13P45452 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP13P45452 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.35■□□□□ 0.53
MMP13P45452 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.35■□□□□ 0.53
MMP13P45452 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP13P45452 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
MMP13P45452 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
MMP13P45452 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP13P45452 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.34■□□□□ 0.53
MMP13P45452 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP13P45452 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP13P45452 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP13P45452 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
MMP13P45452 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
MMP13P45452 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
MMP13P45452 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP13P45452 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP13P45452 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
MMP13P45452 IER3-202ENST00000376377 1350 ntBASIC18.34■□□□□ 0.53
MMP13P45452 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP13P45452 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.34■□□□□ 0.53
MMP13P45452 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP13P45452 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.34■□□□□ 0.53
MMP13P45452 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP13P45452 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.34■□□□□ 0.53
MMP13P45452 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.34■□□□□ 0.53
MMP13P45452 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.34■□□□□ 0.53
MMP13P45452 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.34■□□□□ 0.53
MMP13P45452 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.34■□□□□ 0.53
MMP13P45452 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.34■□□□□ 0.53
MMP13P45452 AC009154.2-201ENST00000621177 724 ntBASIC18.34■□□□□ 0.53
MMP13P45452 AC116407.4-201ENST00000623319 1061 ntBASIC18.34■□□□□ 0.53
MMP13P45452 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms