Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 KRT17P6-201ENST00000453795 1220 ntBASIC17.8■□□□□ 0.44
CHRNA4P43681 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.8■□□□□ 0.44
CHRNA4P43681 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
CHRNA4P43681 AP000867.3-201ENST00000524675 377 ntBASIC17.8■□□□□ 0.44
CHRNA4P43681 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA4P43681 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA4P43681 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.8■□□□□ 0.44
CHRNA4P43681 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CHRNA4P43681 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.8■□□□□ 0.44
CHRNA4P43681 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA4P43681 NSUN5P1-202ENST00000421140 1535 ntBASIC17.8■□□□□ 0.44
CHRNA4P43681 NSUN5P2-203ENST00000457352 1529 ntBASIC17.8■□□□□ 0.44
CHRNA4P43681 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA4P43681 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CHRNA4P43681 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA4P43681 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA4P43681 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CHRNA4P43681 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.8■□□□□ 0.44
CHRNA4P43681 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA4P43681 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA4P43681 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA4P43681 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA4P43681 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA4P43681 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA4P43681 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA4P43681 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.79■□□□□ 0.44
CHRNA4P43681 AC108860.2-201ENST00000562760 2183 ntBASIC17.79■□□□□ 0.44
CHRNA4P43681 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA4P43681 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA4P43681 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA4P43681 CROCCP2-202ENST00000412962 2773 ntBASIC17.79■□□□□ 0.44
CHRNA4P43681 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA4P43681 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA4P43681 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA4P43681 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.79■□□□□ 0.44
CHRNA4P43681 AC005104.2-201ENST00000427818 678 ntBASIC17.79■□□□□ 0.44
CHRNA4P43681 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.79■□□□□ 0.44
CHRNA4P43681 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.79■□□□□ 0.44
CHRNA4P43681 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.79■□□□□ 0.44
CHRNA4P43681 AC074051.2-201ENST00000565115 352 ntBASIC17.79■□□□□ 0.44
CHRNA4P43681 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.79■□□□□ 0.44
CHRNA4P43681 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.79■□□□□ 0.44
CHRNA4P43681 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.79■□□□□ 0.44
CHRNA4P43681 Z69720.1-201ENST00000601483 472 ntBASIC17.79■□□□□ 0.44
CHRNA4P43681 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.79■□□□□ 0.44
CHRNA4P43681 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.79■□□□□ 0.44
CHRNA4P43681 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA4P43681 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.79■□□□□ 0.44
CHRNA4P43681 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.79■□□□□ 0.44
CHRNA4P43681 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA4P43681 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.79■□□□□ 0.44
CHRNA4P43681 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.79■□□□□ 0.44
CHRNA4P43681 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CHRNA4P43681 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA4P43681 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA4P43681 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA4P43681 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CHRNA4P43681 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA4P43681 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.79■□□□□ 0.44
CHRNA4P43681 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA4P43681 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA4P43681 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CHRNA4P43681 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNA4P43681 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA4P43681 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNA4P43681 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHRNA4P43681 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHRNA4P43681 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA4P43681 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNA4P43681 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA4P43681 IGHV3-47-201ENST00000425060 335 ntBASIC17.78■□□□□ 0.44
CHRNA4P43681 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA4P43681 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.78■□□□□ 0.44
CHRNA4P43681 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA4P43681 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.78■□□□□ 0.44
CHRNA4P43681 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA4P43681 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNA4P43681 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNA4P43681 BNIP3P18-201ENST00000593976 575 ntBASIC17.78■□□□□ 0.44
CHRNA4P43681 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CHRNA4P43681 AC092329.2-201ENST00000598402 547 ntBASIC17.78■□□□□ 0.44
CHRNA4P43681 AC019129.2-201ENST00000609837 1235 ntBASIC17.78■□□□□ 0.44
CHRNA4P43681 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNA4P43681 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.78■□□□□ 0.44
CHRNA4P43681 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHRNA4P43681 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA4P43681 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA4P43681 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA4P43681 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA4P43681 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.78■□□□□ 0.44
CHRNA4P43681 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA4P43681 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNA4P43681 AL138688.1-201ENST00000624851 1594 ntBASIC17.78■□□□□ 0.44
CHRNA4P43681 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHRNA4P43681 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA4P43681 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.78■□□□□ 0.44
CHRNA4P43681 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA4P43681 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA4P43681 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNA4P43681 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms