Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTTP42858 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HTTP42858 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC19.64■□□□□ 0.73
HTTP42858 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.64■□□□□ 0.73
HTTP42858 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HTTP42858 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTTP42858 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
HTTP42858 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTTP42858 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTTP42858 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.64■□□□□ 0.73
HTTP42858 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTTP42858 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.64■□□□□ 0.73
HTTP42858 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HTTP42858 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.63■□□□□ 0.73
HTTP42858 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.63■□□□□ 0.73
HTTP42858 LINC01225-203ENST00000563550 1244 ntBASIC19.63■□□□□ 0.73
HTTP42858 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.63■□□□□ 0.73
HTTP42858 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.63■□□□□ 0.73
HTTP42858 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.63■□□□□ 0.73
HTTP42858 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
HTTP42858 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
HTTP42858 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.63■□□□□ 0.73
HTTP42858 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.63■□□□□ 0.73
HTTP42858 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.63■□□□□ 0.73
HTTP42858 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HTTP42858 RPS2P32-201ENST00000439199 892 ntBASIC19.63■□□□□ 0.73
HTTP42858 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.63■□□□□ 0.73
HTTP42858 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.63■□□□□ 0.73
HTTP42858 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.63■□□□□ 0.73
HTTP42858 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.63■□□□□ 0.73
HTTP42858 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.63■□□□□ 0.73
HTTP42858 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HTTP42858 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HTTP42858 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HTTP42858 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HTTP42858 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HTTP42858 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.62■□□□□ 0.73
HTTP42858 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
HTTP42858 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.62■□□□□ 0.73
HTTP42858 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.62■□□□□ 0.73
HTTP42858 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.62■□□□□ 0.73
HTTP42858 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTTP42858 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.62■□□□□ 0.73
HTTP42858 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.62■□□□□ 0.73
HTTP42858 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.62■□□□□ 0.73
HTTP42858 AC007064.4-201ENST00000637740 555 ntBASIC19.62■□□□□ 0.73
HTTP42858 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTTP42858 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTTP42858 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTTP42858 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HTTP42858 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTTP42858 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
HTTP42858 AC002056.1-201ENST00000395613 760 ntBASIC19.62■□□□□ 0.73
HTTP42858 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HTTP42858 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HTTP42858 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.62■□□□□ 0.73
HTTP42858 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTTP42858 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTTP42858 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTTP42858 GMCL1P1-201ENST00000463439 1581 ntBASIC19.62■□□□□ 0.73
HTTP42858 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HTTP42858 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HTTP42858 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.62■□□□□ 0.73
HTTP42858 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.62■□□□□ 0.73
HTTP42858 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTTP42858 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HTTP42858 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HTTP42858 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HTTP42858 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.62■□□□□ 0.73
HTTP42858 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.62■□□□□ 0.73
HTTP42858 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.62■□□□□ 0.73
HTTP42858 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.62■□□□□ 0.73
HTTP42858 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTTP42858 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTTP42858 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
HTTP42858 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.61■□□□□ 0.73
HTTP42858 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTTP42858 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.61■□□□□ 0.73
HTTP42858 AC103564.2-201ENST00000432853 1299 ntBASIC19.61■□□□□ 0.73
HTTP42858 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HTTP42858 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTTP42858 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.61■□□□□ 0.73
HTTP42858 AC026120.1-201ENST00000611536 926 ntBASIC19.61■□□□□ 0.73
HTTP42858 SNX12-206ENST00000622259 661 ntTSL 5 BASIC19.61■□□□□ 0.73
HTTP42858 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTTP42858 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTTP42858 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.61■□□□□ 0.73
HTTP42858 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTTP42858 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTTP42858 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTTP42858 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTTP42858 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HTTP42858 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.61■□□□□ 0.73
HTTP42858 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.61■□□□□ 0.73
HTTP42858 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.61■□□□□ 0.73
HTTP42858 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTTP42858 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTTP42858 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTTP42858 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.6■□□□□ 0.73
HTTP42858 LINC00982-205ENST00000420957 435 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms