Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CEACAM3P40198 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CEACAM3P40198 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CEACAM3P40198 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.42□□□□□ -0.1
CEACAM3P40198 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CEACAM3P40198 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.42□□□□□ -0.1
CEACAM3P40198 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CEACAM3P40198 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CEACAM3P40198 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CEACAM3P40198 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.42□□□□□ -0.1
CEACAM3P40198 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CEACAM3P40198 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.42□□□□□ -0.1
CEACAM3P40198 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.42□□□□□ -0.1
CEACAM3P40198 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.42□□□□□ -0.1
CEACAM3P40198 MIR3652-201ENST00000579335 131 ntBASIC14.42□□□□□ -0.1
CEACAM3P40198 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CEACAM3P40198 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CEACAM3P40198 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CEACAM3P40198 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CEACAM3P40198 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CEACAM3P40198 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CEACAM3P40198 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CEACAM3P40198 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.42□□□□□ -0.1
CEACAM3P40198 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CEACAM3P40198 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CEACAM3P40198 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.42□□□□□ -0.1
CEACAM3P40198 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
CEACAM3P40198 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CEACAM3P40198 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CEACAM3P40198 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CEACAM3P40198 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CEACAM3P40198 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.41□□□□□ -0.1
CEACAM3P40198 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CEACAM3P40198 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CEACAM3P40198 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.41□□□□□ -0.1
CEACAM3P40198 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.41□□□□□ -0.1
CEACAM3P40198 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.41□□□□□ -0.1
CEACAM3P40198 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.41□□□□□ -0.1
CEACAM3P40198 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.41□□□□□ -0.1
CEACAM3P40198 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.41□□□□□ -0.1
CEACAM3P40198 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
CEACAM3P40198 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.41□□□□□ -0.1
CEACAM3P40198 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.41□□□□□ -0.1
CEACAM3P40198 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.41□□□□□ -0.1
CEACAM3P40198 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 AC100803.2-201ENST00000562459 1963 ntBASIC14.41□□□□□ -0.1
CEACAM3P40198 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.41□□□□□ -0.1
CEACAM3P40198 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CEACAM3P40198 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
CEACAM3P40198 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.41□□□□□ -0.1
CEACAM3P40198 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 AC125634.1-201ENST00000438758 1403 ntBASIC14.41□□□□□ -0.1
CEACAM3P40198 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CEACAM3P40198 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CEACAM3P40198 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CEACAM3P40198 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CEACAM3P40198 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CEACAM3P40198 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CEACAM3P40198 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CEACAM3P40198 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
CEACAM3P40198 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CEACAM3P40198 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CEACAM3P40198 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CEACAM3P40198 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CEACAM3P40198 FAM220CP-201ENST00000395253 831 ntBASIC14.4□□□□□ -0.1
CEACAM3P40198 POM121L3P-201ENST00000419331 1163 ntBASIC14.4□□□□□ -0.1
CEACAM3P40198 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.4□□□□□ -0.1
CEACAM3P40198 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.4□□□□□ -0.1
CEACAM3P40198 AL138831.2-201ENST00000606564 490 ntBASIC14.4□□□□□ -0.1
CEACAM3P40198 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CEACAM3P40198 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
CEACAM3P40198 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CEACAM3P40198 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CEACAM3P40198 AC009949.1-201ENST00000623048 1830 ntBASIC14.4□□□□□ -0.1
CEACAM3P40198 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.4□□□□□ -0.1
CEACAM3P40198 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms