Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.63■□□□□ 0.57
CHKAP35790 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHKAP35790 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHKAP35790 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CHKAP35790 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.63■□□□□ 0.57
CHKAP35790 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHKAP35790 MTCL1P1-201ENST00000446207 792 ntBASIC18.63■□□□□ 0.57
CHKAP35790 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.63■□□□□ 0.57
CHKAP35790 AC091607.1-201ENST00000490318 1060 ntBASIC18.63■□□□□ 0.57
CHKAP35790 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.63■□□□□ 0.57
CHKAP35790 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.63■□□□□ 0.57
CHKAP35790 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.63■□□□□ 0.57
CHKAP35790 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.63■□□□□ 0.57
CHKAP35790 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHKAP35790 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.63■□□□□ 0.57
CHKAP35790 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHKAP35790 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHKAP35790 AL732292.2-201ENST00000609649 430 ntBASIC18.63■□□□□ 0.57
CHKAP35790 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHKAP35790 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.63■□□□□ 0.57
CHKAP35790 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHKAP35790 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.63■□□□□ 0.57
CHKAP35790 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHKAP35790 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHKAP35790 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CHKAP35790 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHKAP35790 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHKAP35790 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.63■□□□□ 0.57
CHKAP35790 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHKAP35790 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CHKAP35790 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHKAP35790 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CHKAP35790 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.62■□□□□ 0.57
CHKAP35790 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHKAP35790 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CHKAP35790 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHKAP35790 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHKAP35790 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHKAP35790 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHKAP35790 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHKAP35790 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CHKAP35790 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHKAP35790 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHKAP35790 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.62■□□□□ 0.57
CHKAP35790 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHKAP35790 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.62■□□□□ 0.57
CHKAP35790 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.62■□□□□ 0.57
CHKAP35790 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.62■□□□□ 0.57
CHKAP35790 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHKAP35790 UNC93B7-201ENST00000509439 705 ntBASIC18.62■□□□□ 0.57
CHKAP35790 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.62■□□□□ 0.57
CHKAP35790 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHKAP35790 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.62■□□□□ 0.57
CHKAP35790 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.62■□□□□ 0.57
CHKAP35790 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHKAP35790 KRT18P55-202ENST00000578578 1546 ntBASIC18.62■□□□□ 0.57
CHKAP35790 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHKAP35790 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CHKAP35790 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.62■□□□□ 0.57
CHKAP35790 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHKAP35790 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.62■□□□□ 0.57
CHKAP35790 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHKAP35790 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHKAP35790 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHKAP35790 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHKAP35790 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CHKAP35790 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHKAP35790 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHKAP35790 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
CHKAP35790 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CHKAP35790 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CHKAP35790 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHKAP35790 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CHKAP35790 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHKAP35790 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CHKAP35790 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.61■□□□□ 0.57
CHKAP35790 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHKAP35790 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHKAP35790 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHKAP35790 HCG11-201ENST00000411553 5696 ntBASIC18.61■□□□□ 0.57
CHKAP35790 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHKAP35790 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHKAP35790 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.61■□□□□ 0.57
CHKAP35790 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.61■□□□□ 0.57
CHKAP35790 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHKAP35790 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHKAP35790 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.61■□□□□ 0.57
CHKAP35790 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHKAP35790 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.61■□□□□ 0.57
CHKAP35790 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.61■□□□□ 0.57
CHKAP35790 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.61■□□□□ 0.57
CHKAP35790 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.61■□□□□ 0.57
CHKAP35790 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.61■□□□□ 0.57
CHKAP35790 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.61■□□□□ 0.57
CHKAP35790 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.61■□□□□ 0.57
CHKAP35790 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHKAP35790 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHKAP35790 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHKAP35790 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
CHKAP35790 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms