Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA3P32297 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNA3P32297 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA3P32297 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.62■□□□□ 0.57
CHRNA3P32297 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CHRNA3P32297 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CHRNA3P32297 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHRNA3P32297 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA3P32297 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
CHRNA3P32297 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNA3P32297 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHRNA3P32297 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA3P32297 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA3P32297 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA3P32297 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNA3P32297 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CHRNA3P32297 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNA3P32297 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA3P32297 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNA3P32297 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.61■□□□□ 0.57
CHRNA3P32297 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.61■□□□□ 0.57
CHRNA3P32297 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA3P32297 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHRNA3P32297 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.61■□□□□ 0.57
CHRNA3P32297 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHRNA3P32297 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHRNA3P32297 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CHRNA3P32297 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.61■□□□□ 0.57
CHRNA3P32297 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNA3P32297 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA3P32297 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHRNA3P32297 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA3P32297 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.61■□□□□ 0.57
CHRNA3P32297 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA3P32297 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA3P32297 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA3P32297 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHRNA3P32297 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA3P32297 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA3P32297 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA3P32297 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA3P32297 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA3P32297 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CHRNA3P32297 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRNA3P32297 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA3P32297 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA3P32297 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA3P32297 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA3P32297 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA3P32297 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA3P32297 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA3P32297 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA3P32297 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA3P32297 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.6■□□□□ 0.57
CHRNA3P32297 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.6■□□□□ 0.57
CHRNA3P32297 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
CHRNA3P32297 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.6■□□□□ 0.57
CHRNA3P32297 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.6■□□□□ 0.57
CHRNA3P32297 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA3P32297 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA3P32297 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.6■□□□□ 0.57
CHRNA3P32297 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA3P32297 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CHRNA3P32297 NKILA-202ENST00000614771 2598 ntBASIC18.6■□□□□ 0.57
CHRNA3P32297 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA3P32297 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA3P32297 AC124067.4-201ENST00000519691 2379 ntBASIC18.6■□□□□ 0.57
CHRNA3P32297 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRNA3P32297 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA3P32297 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA3P32297 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CHRNA3P32297 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA3P32297 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CHRNA3P32297 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA3P32297 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRNA3P32297 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CHRNA3P32297 LINC00167-201ENST00000530583 1419 ntBASIC18.59■□□□□ 0.57
CHRNA3P32297 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA3P32297 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.59■□□□□ 0.57
CHRNA3P32297 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA3P32297 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRNA3P32297 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA3P32297 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRNA3P32297 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CHRNA3P32297 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA3P32297 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.59■□□□□ 0.57
CHRNA3P32297 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.59■□□□□ 0.57
CHRNA3P32297 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRNA3P32297 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRNA3P32297 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRNA3P32297 AC116407.2-201ENST00000613639 860 ntBASIC18.59■□□□□ 0.57
CHRNA3P32297 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA3P32297 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA3P32297 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRNA3P32297 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA3P32297 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CHRNA3P32297 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CHRNA3P32297 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRNA3P32297 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA3P32297 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms