Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 RN7SL589P-201ENST00000481268 310 ntBASIC17.29■□□□□ 0.36
HOXA6P31267 AP001059.3-201ENST00000619053 235 ntBASIC17.29■□□□□ 0.36
HOXA6P31267 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA6P31267 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA6P31267 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA6P31267 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXA6P31267 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXA6P31267 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA6P31267 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA6P31267 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA6P31267 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA6P31267 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HOXA6P31267 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXA6P31267 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXA6P31267 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.28■□□□□ 0.36
HOXA6P31267 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA6P31267 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXA6P31267 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HOXA6P31267 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA6P31267 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA6P31267 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA6P31267 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA6P31267 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA6P31267 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA6P31267 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXA6P31267 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA6P31267 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA6P31267 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA6P31267 AC005237.2-201ENST00000434368 219 ntBASIC17.28■□□□□ 0.36
HOXA6P31267 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HOXA6P31267 SPDYE11-202ENST00000450699 704 ntBASIC17.28■□□□□ 0.36
HOXA6P31267 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA6P31267 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HOXA6P31267 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.28■□□□□ 0.36
HOXA6P31267 AC093214.1-201ENST00000511688 1107 ntBASIC17.28■□□□□ 0.36
HOXA6P31267 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA6P31267 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.28■□□□□ 0.36
HOXA6P31267 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.28■□□□□ 0.36
HOXA6P31267 SPDYE9P-201ENST00000570642 692 ntBASIC17.28■□□□□ 0.36
HOXA6P31267 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.28■□□□□ 0.36
HOXA6P31267 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.28■□□□□ 0.36
HOXA6P31267 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.28■□□□□ 0.36
HOXA6P31267 AC099522.2-201ENST00000607001 744 ntBASIC17.28■□□□□ 0.36
HOXA6P31267 SPDYE10P-202ENST00000612005 668 ntBASIC17.28■□□□□ 0.36
HOXA6P31267 SPDYE8P-202ENST00000612377 668 ntBASIC17.28■□□□□ 0.36
HOXA6P31267 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA6P31267 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXA6P31267 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA6P31267 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA6P31267 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.28■□□□□ 0.36
HOXA6P31267 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA6P31267 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.28■□□□□ 0.36
HOXA6P31267 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
HOXA6P31267 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXA6P31267 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA6P31267 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA6P31267 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.27■□□□□ 0.36
HOXA6P31267 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.27■□□□□ 0.36
HOXA6P31267 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
HOXA6P31267 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA6P31267 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HOXA6P31267 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA6P31267 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA6P31267 AC009949.1-201ENST00000623048 1830 ntBASIC17.27■□□□□ 0.36
HOXA6P31267 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA6P31267 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA6P31267 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA6P31267 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
HOXA6P31267 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.27■□□□□ 0.36
HOXA6P31267 KRT8P48-201ENST00000515599 1220 ntBASIC17.27■□□□□ 0.36
HOXA6P31267 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.27■□□□□ 0.36
HOXA6P31267 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.27■□□□□ 0.36
HOXA6P31267 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.27■□□□□ 0.36
HOXA6P31267 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA6P31267 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA6P31267 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA6P31267 AL035252.4-201ENST00000624174 288 ntBASIC17.27■□□□□ 0.36
HOXA6P31267 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA6P31267 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA6P31267 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.27■□□□□ 0.36
HOXA6P31267 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA6P31267 AL096828.2-201ENST00000567259 1965 ntBASIC17.27■□□□□ 0.36
HOXA6P31267 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HOXA6P31267 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.27■□□□□ 0.35
HOXA6P31267 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXA6P31267 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.27■□□□□ 0.35
HOXA6P31267 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXA6P31267 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.26■□□□□ 0.35
HOXA6P31267 AKAP8P1-201ENST00000434743 1349 ntBASIC17.26■□□□□ 0.35
HOXA6P31267 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA6P31267 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.26■□□□□ 0.35
HOXA6P31267 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.26■□□□□ 0.35
HOXA6P31267 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA6P31267 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXA6P31267 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HOXA6P31267 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HOXA6P31267 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXA6P31267 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA6P31267 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA6P31267 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms