Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VAMP1P23763 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VAMP1P23763 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP1P23763 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP1P23763 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP1P23763 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.92□□□□□ -0.02
VAMP1P23763 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP1P23763 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
VAMP1P23763 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VAMP1P23763 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.92□□□□□ -0.02
VAMP1P23763 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.92□□□□□ -0.02
VAMP1P23763 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP1P23763 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP1P23763 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.92□□□□□ -0.02
VAMP1P23763 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP1P23763 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
VAMP1P23763 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.92□□□□□ -0.02
VAMP1P23763 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.92□□□□□ -0.02
VAMP1P23763 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.92□□□□□ -0.02
VAMP1P23763 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.92□□□□□ -0.02
VAMP1P23763 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.92□□□□□ -0.02
VAMP1P23763 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.92□□□□□ -0.02
VAMP1P23763 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
VAMP1P23763 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.92□□□□□ -0.02
VAMP1P23763 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.92□□□□□ -0.02
VAMP1P23763 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.92□□□□□ -0.02
VAMP1P23763 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
VAMP1P23763 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
VAMP1P23763 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP1P23763 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP1P23763 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP1P23763 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.92□□□□□ -0.02
VAMP1P23763 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
VAMP1P23763 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.92□□□□□ -0.02
VAMP1P23763 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP1P23763 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP1P23763 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
VAMP1P23763 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.92□□□□□ -0.02
VAMP1P23763 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP1P23763 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP1P23763 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.92□□□□□ -0.02
VAMP1P23763 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP1P23763 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP1P23763 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP1P23763 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
VAMP1P23763 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP1P23763 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VAMP1P23763 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.92□□□□□ -0.02
VAMP1P23763 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.92□□□□□ -0.02
VAMP1P23763 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.91□□□□□ -0.02
VAMP1P23763 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP1P23763 AC007326.2-201ENST00000624224 7579 ntBASIC14.91□□□□□ -0.02
VAMP1P23763 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.91□□□□□ -0.02
VAMP1P23763 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
VAMP1P23763 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.91□□□□□ -0.02
VAMP1P23763 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP1P23763 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.91□□□□□ -0.02
VAMP1P23763 HYMAI-201ENST00000635591 3347 ntBASIC14.91□□□□□ -0.02
VAMP1P23763 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.91□□□□□ -0.02
VAMP1P23763 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
VAMP1P23763 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP1P23763 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.91□□□□□ -0.02
VAMP1P23763 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP1P23763 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VAMP1P23763 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.91□□□□□ -0.02
VAMP1P23763 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP1P23763 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
VAMP1P23763 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
VAMP1P23763 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.91□□□□□ -0.02
VAMP1P23763 NIFKP9-201ENST00000419265 221 ntBASIC14.91□□□□□ -0.02
VAMP1P23763 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP1P23763 TSPY6P-201ENST00000448518 926 ntBASIC14.91□□□□□ -0.02
VAMP1P23763 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.91□□□□□ -0.02
VAMP1P23763 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
VAMP1P23763 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.91□□□□□ -0.02
VAMP1P23763 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.91□□□□□ -0.02
VAMP1P23763 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.91□□□□□ -0.02
VAMP1P23763 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.91□□□□□ -0.02
VAMP1P23763 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP1P23763 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP1P23763 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.91□□□□□ -0.02
VAMP1P23763 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP1P23763 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP1P23763 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP1P23763 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP1P23763 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP1P23763 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.91□□□□□ -0.02
VAMP1P23763 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP1P23763 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP1P23763 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP1P23763 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VAMP1P23763 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP1P23763 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP1P23763 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP1P23763 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VAMP1P23763 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VAMP1P23763 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VAMP1P23763 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VAMP1P23763 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.9□□□□□ -0.02
VAMP1P23763 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms