Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP8P22894 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.55■□□□□ 0.56
MMP8P22894 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
MMP8P22894 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP8P22894 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP8P22894 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP8P22894 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.55■□□□□ 0.56
MMP8P22894 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
MMP8P22894 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MMP8P22894 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.55■□□□□ 0.56
MMP8P22894 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.55■□□□□ 0.56
MMP8P22894 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP8P22894 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP8P22894 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
MMP8P22894 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP8P22894 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP8P22894 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.54■□□□□ 0.56
MMP8P22894 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP8P22894 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.54■□□□□ 0.56
MMP8P22894 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP8P22894 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.54■□□□□ 0.56
MMP8P22894 TP73-AS1-210ENST00000637775 1455 ntBASIC18.54■□□□□ 0.56
MMP8P22894 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.54■□□□□ 0.56
MMP8P22894 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
MMP8P22894 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
MMP8P22894 MYCLP1-201ENST00000372451 1075 ntBASIC18.54■□□□□ 0.56
MMP8P22894 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.54■□□□□ 0.56
MMP8P22894 LINC00265-3P-201ENST00000447588 903 ntBASIC18.54■□□□□ 0.56
MMP8P22894 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.54■□□□□ 0.56
MMP8P22894 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.54■□□□□ 0.56
MMP8P22894 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.54■□□□□ 0.56
MMP8P22894 AC016396.2-201ENST00000562575 1417 ntBASIC18.54■□□□□ 0.56
MMP8P22894 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP8P22894 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MMP8P22894 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP8P22894 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP8P22894 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MMP8P22894 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP8P22894 NSUN5P1-202ENST00000421140 1535 ntBASIC18.54■□□□□ 0.56
MMP8P22894 NSUN5P2-203ENST00000457352 1529 ntBASIC18.54■□□□□ 0.56
MMP8P22894 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MMP8P22894 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP8P22894 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.53■□□□□ 0.56
MMP8P22894 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP8P22894 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.53■□□□□ 0.56
MMP8P22894 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.53■□□□□ 0.56
MMP8P22894 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MMP8P22894 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.53■□□□□ 0.56
MMP8P22894 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MMP8P22894 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MMP8P22894 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP8P22894 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP8P22894 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MMP8P22894 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MMP8P22894 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP8P22894 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.53■□□□□ 0.56
MMP8P22894 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MMP8P22894 KRT8P10-201ENST00000450021 1447 ntBASIC18.53■□□□□ 0.56
MMP8P22894 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.53■□□□□ 0.56
MMP8P22894 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.53■□□□□ 0.56
MMP8P22894 IGHV3-52-201ENST00000519770 353 ntBASIC18.53■□□□□ 0.56
MMP8P22894 BNIP3P18-201ENST00000593976 575 ntBASIC18.53■□□□□ 0.56
MMP8P22894 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.53■□□□□ 0.56
MMP8P22894 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP8P22894 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.53■□□□□ 0.56
MMP8P22894 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.53■□□□□ 0.56
MMP8P22894 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.53■□□□□ 0.56
MMP8P22894 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
MMP8P22894 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
MMP8P22894 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.53■□□□□ 0.56
MMP8P22894 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.53■□□□□ 0.56
MMP8P22894 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.52■□□□□ 0.56
MMP8P22894 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP8P22894 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP8P22894 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP8P22894 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
MMP8P22894 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP8P22894 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
MMP8P22894 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MMP8P22894 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.52■□□□□ 0.56
MMP8P22894 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
MMP8P22894 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.52■□□□□ 0.56
MMP8P22894 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.52■□□□□ 0.56
MMP8P22894 AP001094.4-201ENST00000579008 2176 ntBASIC18.52■□□□□ 0.56
MMP8P22894 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
MMP8P22894 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MMP8P22894 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
MMP8P22894 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
MMP8P22894 AL353593.2-201ENST00000602529 1483 ntBASIC18.52■□□□□ 0.55
MMP8P22894 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.51■□□□□ 0.55
MMP8P22894 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
MMP8P22894 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP8P22894 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP8P22894 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.51■□□□□ 0.55
MMP8P22894 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
MMP8P22894 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP8P22894 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP8P22894 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP8P22894 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP8P22894 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms