Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 INGX-201ENST00000359239 846 ntBASIC17■□□□□ 0.31
CAPN3P20807 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
CAPN3P20807 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17■□□□□ 0.31
CAPN3P20807 PCED1CP-201ENST00000419887 785 ntBASIC17■□□□□ 0.31
CAPN3P20807 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 DUSP5P1-201ENST00000441325 1139 ntBASIC17■□□□□ 0.31
CAPN3P20807 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CAPN3P20807 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17■□□□□ 0.31
CAPN3P20807 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17■□□□□ 0.31
CAPN3P20807 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17■□□□□ 0.31
CAPN3P20807 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17■□□□□ 0.31
CAPN3P20807 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17■□□□□ 0.31
CAPN3P20807 FAM87A-204ENST00000613235 858 ntBASIC17■□□□□ 0.31
CAPN3P20807 AC116407.2-201ENST00000613639 860 ntBASIC17■□□□□ 0.31
CAPN3P20807 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17■□□□□ 0.31
CAPN3P20807 AC010653.2-201ENST00000623505 997 ntBASIC17■□□□□ 0.31
CAPN3P20807 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17■□□□□ 0.31
CAPN3P20807 AL031432.5-201ENST00000641059 760 ntBASIC17■□□□□ 0.31
CAPN3P20807 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 KRT8P47-201ENST00000604727 1398 ntBASIC17■□□□□ 0.31
CAPN3P20807 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17■□□□□ 0.31
CAPN3P20807 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 UBALD1-205ENST00000590891 2641 ntBASIC17■□□□□ 0.31
CAPN3P20807 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17■□□□□ 0.31
CAPN3P20807 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CAPN3P20807 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.99■□□□□ 0.31
CAPN3P20807 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CAPN3P20807 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.99■□□□□ 0.31
CAPN3P20807 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CAPN3P20807 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.99■□□□□ 0.31
CAPN3P20807 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CAPN3P20807 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.99■□□□□ 0.31
CAPN3P20807 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CAPN3P20807 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
CAPN3P20807 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
CAPN3P20807 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.99■□□□□ 0.31
CAPN3P20807 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.99■□□□□ 0.31
CAPN3P20807 MIR3917-201ENST00000580971 93 ntBASIC16.99■□□□□ 0.31
CAPN3P20807 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.99■□□□□ 0.31
CAPN3P20807 AC008687.5-201ENST00000593746 558 ntBASIC16.99■□□□□ 0.31
CAPN3P20807 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
CAPN3P20807 AC139887.4-201ENST00000607877 719 ntBASIC16.99■□□□□ 0.31
CAPN3P20807 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.99■□□□□ 0.31
CAPN3P20807 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CAPN3P20807 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.99■□□□□ 0.31
CAPN3P20807 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CAPN3P20807 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.99■□□□□ 0.31
CAPN3P20807 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPN3P20807 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.99■□□□□ 0.31
CAPN3P20807 AGGF1P2-201ENST00000426656 2106 ntBASIC16.99■□□□□ 0.31
CAPN3P20807 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.98■□□□□ 0.31
CAPN3P20807 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN3P20807 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.98■□□□□ 0.31
CAPN3P20807 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.98■□□□□ 0.31
CAPN3P20807 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.98■□□□□ 0.31
CAPN3P20807 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.98■□□□□ 0.31
CAPN3P20807 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN3P20807 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN3P20807 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN3P20807 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN3P20807 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN3P20807 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN3P20807 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.98■□□□□ 0.31
CAPN3P20807 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms