Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
XRCC1P18887 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
XRCC1P18887 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XRCC1P18887 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
XRCC1P18887 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
XRCC1P18887 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XRCC1P18887 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XRCC1P18887 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
XRCC1P18887 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
XRCC1P18887 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
XRCC1P18887 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XRCC1P18887 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.61■□□□□ 0.41
XRCC1P18887 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XRCC1P18887 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.61■□□□□ 0.41
XRCC1P18887 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
XRCC1P18887 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.61■□□□□ 0.41
XRCC1P18887 AL845331.1-201ENST00000424978 1190 ntBASIC17.61■□□□□ 0.41
XRCC1P18887 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.61■□□□□ 0.41
XRCC1P18887 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.61■□□□□ 0.41
XRCC1P18887 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
XRCC1P18887 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.61■□□□□ 0.41
XRCC1P18887 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.61■□□□□ 0.41
XRCC1P18887 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.61■□□□□ 0.41
XRCC1P18887 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
XRCC1P18887 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.61■□□□□ 0.41
XRCC1P18887 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XRCC1P18887 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XRCC1P18887 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
XRCC1P18887 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
XRCC1P18887 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XRCC1P18887 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XRCC1P18887 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
XRCC1P18887 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
XRCC1P18887 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 LINC00602-201ENST00000629776 2065 ntBASIC17.6■□□□□ 0.41
XRCC1P18887 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
XRCC1P18887 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
XRCC1P18887 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.6■□□□□ 0.41
XRCC1P18887 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.6■□□□□ 0.41
XRCC1P18887 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.6■□□□□ 0.41
XRCC1P18887 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
XRCC1P18887 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.6■□□□□ 0.41
XRCC1P18887 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
XRCC1P18887 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
XRCC1P18887 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XRCC1P18887 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC1P18887 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC1P18887 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC1P18887 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
XRCC1P18887 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC1P18887 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC1P18887 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.59■□□□□ 0.41
XRCC1P18887 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.59■□□□□ 0.41
XRCC1P18887 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC1P18887 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC1P18887 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC1P18887 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC1P18887 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC1P18887 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.59■□□□□ 0.41
XRCC1P18887 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.59■□□□□ 0.41
XRCC1P18887 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC1P18887 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.59■□□□□ 0.41
XRCC1P18887 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC1P18887 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC1P18887 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC1P18887 LINC00167-201ENST00000530583 1419 ntBASIC17.59■□□□□ 0.41
XRCC1P18887 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC1P18887 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
XRCC1P18887 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC1P18887 TSPY19P-201ENST00000418461 509 ntBASIC17.59■□□□□ 0.41
XRCC1P18887 TSPY18P-201ENST00000441642 509 ntBASIC17.59■□□□□ 0.41
XRCC1P18887 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC1P18887 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.59■□□□□ 0.41
XRCC1P18887 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.59■□□□□ 0.41
XRCC1P18887 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms