Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AP002414.4-201ENST00000589764 1148 ntBASIC17.77■□□□□ 0.44
VCLP18206 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.77■□□□□ 0.44
VCLP18206 AC092119.3-201ENST00000612618 583 ntBASIC17.77■□□□□ 0.44
VCLP18206 NPAP1P7-201ENST00000613027 823 ntBASIC17.77■□□□□ 0.44
VCLP18206 AC009154.2-201ENST00000621177 724 ntBASIC17.77■□□□□ 0.44
VCLP18206 AC124864.1-201ENST00000623408 392 ntBASIC17.77■□□□□ 0.44
VCLP18206 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
VCLP18206 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VCLP18206 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
VCLP18206 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VCLP18206 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VCLP18206 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
VCLP18206 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
VCLP18206 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.77■□□□□ 0.43
VCLP18206 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
VCLP18206 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
VCLP18206 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
VCLP18206 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.77■□□□□ 0.43
VCLP18206 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
VCLP18206 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.77■□□□□ 0.43
VCLP18206 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VCLP18206 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCLP18206 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCLP18206 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.76■□□□□ 0.43
VCLP18206 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCLP18206 LINC00602-201ENST00000629776 2065 ntBASIC17.76■□□□□ 0.43
VCLP18206 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCLP18206 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.76■□□□□ 0.43
VCLP18206 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.76■□□□□ 0.43
VCLP18206 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCLP18206 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCLP18206 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
VCLP18206 AC108860.2-201ENST00000562760 2183 ntBASIC17.76■□□□□ 0.43
VCLP18206 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCLP18206 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VCLP18206 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
VCLP18206 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
VCLP18206 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCLP18206 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.76■□□□□ 0.43
VCLP18206 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.76■□□□□ 0.43
VCLP18206 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VCLP18206 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.76■□□□□ 0.43
VCLP18206 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCLP18206 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCLP18206 DRAXINP1-201ENST00000437611 948 ntBASIC17.76■□□□□ 0.43
VCLP18206 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.76■□□□□ 0.43
VCLP18206 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VCLP18206 AL592071.1-201ENST00000611956 408 ntBASIC17.76■□□□□ 0.43
VCLP18206 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCLP18206 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCLP18206 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.76■□□□□ 0.43
VCLP18206 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCLP18206 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCLP18206 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCLP18206 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.76■□□□□ 0.43
VCLP18206 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCLP18206 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VCLP18206 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VCLP18206 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.76■□□□□ 0.43
VCLP18206 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCLP18206 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCLP18206 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
VCLP18206 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
VCLP18206 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCLP18206 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VCLP18206 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VCLP18206 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VCLP18206 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VCLP18206 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCLP18206 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VCLP18206 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VCLP18206 KRT18P65-201ENST00000439811 1286 ntBASIC17.75■□□□□ 0.43
VCLP18206 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCLP18206 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.75■□□□□ 0.43
VCLP18206 AC011840.4-201ENST00000578471 627 ntBASIC17.75■□□□□ 0.43
VCLP18206 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.75■□□□□ 0.43
VCLP18206 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.75■□□□□ 0.43
VCLP18206 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.75■□□□□ 0.43
VCLP18206 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCLP18206 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCLP18206 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
VCLP18206 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCLP18206 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.75■□□□□ 0.43
VCLP18206 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
VCLP18206 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.75■□□□□ 0.43
VCLP18206 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VCLP18206 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCLP18206 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
VCLP18206 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.75■□□□□ 0.43
VCLP18206 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCLP18206 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCLP18206 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VCLP18206 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCLP18206 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCLP18206 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCLP18206 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCLP18206 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
VCLP18206 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.74■□□□□ 0.43
VCLP18206 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCLP18206 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms