Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 FAM220CP-201ENST00000395253 831 ntBASIC19.37■□□□□ 0.69
ITGA4P13612 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
ITGA4P13612 AL031284.1-201ENST00000419297 478 ntBASIC19.37■□□□□ 0.69
ITGA4P13612 AC073648.2-201ENST00000510116 352 ntBASIC19.37■□□□□ 0.69
ITGA4P13612 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.37■□□□□ 0.69
ITGA4P13612 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.37■□□□□ 0.69
ITGA4P13612 AC148477.8-201ENST00000624298 468 ntBASIC19.37■□□□□ 0.69
ITGA4P13612 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ITGA4P13612 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.37■□□□□ 0.69
ITGA4P13612 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ITGA4P13612 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ITGA4P13612 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.37■□□□□ 0.69
ITGA4P13612 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.37■□□□□ 0.69
ITGA4P13612 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.37■□□□□ 0.69
ITGA4P13612 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ITGA4P13612 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA4P13612 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA4P13612 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA4P13612 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA4P13612 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.36■□□□□ 0.69
ITGA4P13612 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA4P13612 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA4P13612 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA4P13612 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA4P13612 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA4P13612 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA4P13612 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA4P13612 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA4P13612 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA4P13612 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ITGA4P13612 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA4P13612 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.36■□□□□ 0.69
ITGA4P13612 AC007967.3-201ENST00000434308 558 ntBASIC19.36■□□□□ 0.69
ITGA4P13612 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA4P13612 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ITGA4P13612 RNPS1P1-201ENST00000507437 918 ntBASIC19.36■□□□□ 0.69
ITGA4P13612 RNA5SP419-201ENST00000515908 135 ntBASIC19.36■□□□□ 0.69
ITGA4P13612 DUTP2-201ENST00000519164 463 ntBASIC19.36■□□□□ 0.69
ITGA4P13612 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.36■□□□□ 0.69
ITGA4P13612 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.36■□□□□ 0.69
ITGA4P13612 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.36■□□□□ 0.69
ITGA4P13612 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.36■□□□□ 0.69
ITGA4P13612 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA4P13612 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA4P13612 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
ITGA4P13612 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA4P13612 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA4P13612 AC139713.2-201ENST00000641328 2723 ntBASIC19.36■□□□□ 0.69
ITGA4P13612 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ITGA4P13612 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA4P13612 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.36■□□□□ 0.69
ITGA4P13612 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.35■□□□□ 0.69
ITGA4P13612 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA4P13612 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA4P13612 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.35■□□□□ 0.69
ITGA4P13612 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA4P13612 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ITGA4P13612 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA4P13612 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA4P13612 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.35■□□□□ 0.69
ITGA4P13612 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.35■□□□□ 0.69
ITGA4P13612 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.35■□□□□ 0.69
ITGA4P13612 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.35■□□□□ 0.69
ITGA4P13612 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.35■□□□□ 0.69
ITGA4P13612 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA4P13612 AC120114.3-201ENST00000611923 658 ntBASIC19.35■□□□□ 0.69
ITGA4P13612 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.35■□□□□ 0.69
ITGA4P13612 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.35■□□□□ 0.69
ITGA4P13612 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.35■□□□□ 0.69
ITGA4P13612 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA4P13612 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA4P13612 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA4P13612 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.34■□□□□ 0.69
ITGA4P13612 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA4P13612 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
ITGA4P13612 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
ITGA4P13612 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ITGA4P13612 AC012313.1-201ENST00000593393 3059 ntBASIC19.34■□□□□ 0.69
ITGA4P13612 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.34■□□□□ 0.69
ITGA4P13612 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA4P13612 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ITGA4P13612 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.34■□□□□ 0.69
ITGA4P13612 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.34■□□□□ 0.69
ITGA4P13612 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA4P13612 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.34■□□□□ 0.69
ITGA4P13612 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA4P13612 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
ITGA4P13612 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA4P13612 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA4P13612 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA4P13612 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA4P13612 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA4P13612 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA4P13612 AL590627.1-203ENST00000421194 1026 ntBASIC19.34■□□□□ 0.69
ITGA4P13612 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
ITGA4P13612 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.34■□□□□ 0.69
ITGA4P13612 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.34■□□□□ 0.69
ITGA4P13612 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ITGA4P13612 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.34■□□□□ 0.69
ITGA4P13612 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms