Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRFP11831 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SRFP11831 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SRFP11831 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRFP11831 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRFP11831 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRFP11831 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRFP11831 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.72■□□□□ 0.43
SRFP11831 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRFP11831 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.72■□□□□ 0.43
SRFP11831 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.72■□□□□ 0.43
SRFP11831 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRFP11831 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRFP11831 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.72■□□□□ 0.43
SRFP11831 TERF1P3-201ENST00000505638 1227 ntBASIC17.72■□□□□ 0.43
SRFP11831 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.72■□□□□ 0.43
SRFP11831 KRT8P48-201ENST00000515599 1220 ntBASIC17.72■□□□□ 0.43
SRFP11831 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.72■□□□□ 0.43
SRFP11831 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SRFP11831 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SRFP11831 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SRFP11831 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRFP11831 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRFP11831 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.71■□□□□ 0.43
SRFP11831 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRFP11831 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SRFP11831 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRFP11831 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SRFP11831 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRFP11831 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SRFP11831 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRFP11831 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.71■□□□□ 0.43
SRFP11831 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SRFP11831 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRFP11831 AC055876.3-201ENST00000431496 288 ntBASIC17.71■□□□□ 0.43
SRFP11831 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.71■□□□□ 0.43
SRFP11831 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.71■□□□□ 0.43
SRFP11831 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.71■□□□□ 0.43
SRFP11831 AC069335.1-201ENST00000489972 472 ntBASIC17.71■□□□□ 0.43
SRFP11831 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.71■□□□□ 0.43
SRFP11831 AC051619.7-201ENST00000568314 623 ntBASIC17.71■□□□□ 0.43
SRFP11831 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRFP11831 AC099522.2-201ENST00000607001 744 ntBASIC17.71■□□□□ 0.43
SRFP11831 AC138649.4-201ENST00000612222 287 ntBASIC17.71■□□□□ 0.43
SRFP11831 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRFP11831 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRFP11831 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.71■□□□□ 0.43
SRFP11831 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRFP11831 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SRFP11831 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
SRFP11831 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.71■□□□□ 0.42
SRFP11831 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.71■□□□□ 0.42
SRFP11831 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SRFP11831 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.71■□□□□ 0.42
SRFP11831 AC129492.6-201ENST00000611383 1305 ntBASIC17.71■□□□□ 0.42
SRFP11831 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.71■□□□□ 0.42
SRFP11831 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.71■□□□□ 0.42
SRFP11831 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.7■□□□□ 0.42
SRFP11831 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRFP11831 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRFP11831 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRFP11831 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRFP11831 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRFP11831 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRFP11831 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRFP11831 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.7■□□□□ 0.42
SRFP11831 AL592309.1-201ENST00000443127 649 ntBASIC17.7■□□□□ 0.42
SRFP11831 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRFP11831 RN7SL589P-201ENST00000481268 310 ntBASIC17.7■□□□□ 0.42
SRFP11831 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.7■□□□□ 0.42
SRFP11831 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.7■□□□□ 0.42
SRFP11831 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.7■□□□□ 0.42
SRFP11831 AL512356.2-201ENST00000546955 174 ntBASIC17.7■□□□□ 0.42
SRFP11831 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.7■□□□□ 0.42
SRFP11831 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.7■□□□□ 0.42
SRFP11831 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.7■□□□□ 0.42
SRFP11831 AC012645.4-201ENST00000610691 1061 ntBASIC17.7■□□□□ 0.42
SRFP11831 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.7■□□□□ 0.42
SRFP11831 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRFP11831 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRFP11831 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRFP11831 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRFP11831 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.7■□□□□ 0.42
SRFP11831 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRFP11831 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.7■□□□□ 0.42
SRFP11831 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRFP11831 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRFP11831 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRFP11831 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
SRFP11831 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.7■□□□□ 0.42
SRFP11831 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRFP11831 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.7■□□□□ 0.42
SRFP11831 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRFP11831 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.7■□□□□ 0.42
SRFP11831 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRFP11831 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRFP11831 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.7■□□□□ 0.42
SRFP11831 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
SRFP11831 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.69■□□□□ 0.42
SRFP11831 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms