Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.73■□□□□ 0.91
TOP1P11387 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.73■□□□□ 0.91
TOP1P11387 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TOP1P11387 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TOP1P11387 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TOP1P11387 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.73■□□□□ 0.91
TOP1P11387 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.73■□□□□ 0.91
TOP1P11387 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TOP1P11387 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TOP1P11387 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.72■□□□□ 0.91
TOP1P11387 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.72■□□□□ 0.91
TOP1P11387 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TOP1P11387 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TOP1P11387 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TOP1P11387 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TOP1P11387 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TOP1P11387 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
TOP1P11387 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.72■□□□□ 0.91
TOP1P11387 AC009078.2-202ENST00000463353 338 ntBASIC20.72■□□□□ 0.91
TOP1P11387 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.72■□□□□ 0.91
TOP1P11387 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.72■□□□□ 0.91
TOP1P11387 MTDHP3-201ENST00000594186 672 ntBASIC20.72■□□□□ 0.91
TOP1P11387 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.72■□□□□ 0.91
TOP1P11387 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TOP1P11387 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.72■□□□□ 0.91
TOP1P11387 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TOP1P11387 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.72■□□□□ 0.91
TOP1P11387 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TOP1P11387 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TOP1P11387 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TOP1P11387 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TOP1P11387 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
TOP1P11387 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TOP1P11387 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TOP1P11387 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TOP1P11387 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.71■□□□□ 0.91
TOP1P11387 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.71■□□□□ 0.91
TOP1P11387 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TOP1P11387 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TOP1P11387 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TOP1P11387 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TOP1P11387 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TOP1P11387 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.71■□□□□ 0.91
TOP1P11387 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TOP1P11387 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.71■□□□□ 0.91
TOP1P11387 AC103564.2-201ENST00000432853 1299 ntBASIC20.71■□□□□ 0.91
TOP1P11387 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
TOP1P11387 FGFR3P6-201ENST00000457012 610 ntBASIC20.71■□□□□ 0.91
TOP1P11387 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.71■□□□□ 0.91
TOP1P11387 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.71■□□□□ 0.91
TOP1P11387 TP73-AS1-207ENST00000624167 988 ntBASIC20.71■□□□□ 0.91
TOP1P11387 AP000867.4-201ENST00000641616 219 ntBASIC20.71■□□□□ 0.91
TOP1P11387 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.71■□□□□ 0.91
TOP1P11387 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TOP1P11387 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.71■□□□□ 0.91
TOP1P11387 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TOP1P11387 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TOP1P11387 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TOP1P11387 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TOP1P11387 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
TOP1P11387 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TOP1P11387 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TOP1P11387 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.71■□□□□ 0.91
TOP1P11387 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TOP1P11387 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.7■□□□□ 0.9
TOP1P11387 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.7■□□□□ 0.9
TOP1P11387 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TOP1P11387 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.7■□□□□ 0.9
TOP1P11387 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TOP1P11387 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TOP1P11387 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TOP1P11387 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
TOP1P11387 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TOP1P11387 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TOP1P11387 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.7■□□□□ 0.9
TOP1P11387 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.7■□□□□ 0.9
TOP1P11387 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.7■□□□□ 0.9
TOP1P11387 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.7■□□□□ 0.9
TOP1P11387 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.7■□□□□ 0.9
TOP1P11387 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.7■□□□□ 0.9
TOP1P11387 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TOP1P11387 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.7■□□□□ 0.9
TOP1P11387 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TOP1P11387 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.7■□□□□ 0.9
TOP1P11387 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TOP1P11387 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.7■□□□□ 0.9
TOP1P11387 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.7■□□□□ 0.9
TOP1P11387 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TOP1P11387 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TOP1P11387 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TOP1P11387 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TOP1P11387 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TOP1P11387 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TOP1P11387 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TOP1P11387 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.69■□□□□ 0.9
TOP1P11387 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TOP1P11387 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.69■□□□□ 0.9
TOP1P11387 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TOP1P11387 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
TOP1P11387 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms