Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LAMP1P11279 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.73■□□□□ 0.27
LAMP1P11279 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.73■□□□□ 0.27
LAMP1P11279 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LAMP1P11279 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LAMP1P11279 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LAMP1P11279 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.73■□□□□ 0.27
LAMP1P11279 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LAMP1P11279 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LAMP1P11279 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LAMP1P11279 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LAMP1P11279 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LAMP1P11279 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.73■□□□□ 0.27
LAMP1P11279 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.73■□□□□ 0.27
LAMP1P11279 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.73■□□□□ 0.27
LAMP1P11279 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.73■□□□□ 0.27
LAMP1P11279 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.73■□□□□ 0.27
LAMP1P11279 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LAMP1P11279 AC099398.1-201ENST00000567919 2776 ntBASIC16.73■□□□□ 0.27
LAMP1P11279 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.73■□□□□ 0.27
LAMP1P11279 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LAMP1P11279 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.73■□□□□ 0.27
LAMP1P11279 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.73■□□□□ 0.27
LAMP1P11279 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LAMP1P11279 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LAMP1P11279 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LAMP1P11279 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.72■□□□□ 0.27
LAMP1P11279 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.72■□□□□ 0.27
LAMP1P11279 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LAMP1P11279 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LAMP1P11279 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LAMP1P11279 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LAMP1P11279 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LAMP1P11279 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LAMP1P11279 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LAMP1P11279 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LAMP1P11279 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.72■□□□□ 0.27
LAMP1P11279 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LAMP1P11279 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.72■□□□□ 0.27
LAMP1P11279 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LAMP1P11279 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.72■□□□□ 0.27
LAMP1P11279 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.72■□□□□ 0.27
LAMP1P11279 AC096633.1-201ENST00000422446 749 ntBASIC16.72■□□□□ 0.27
LAMP1P11279 AC063952.2-201ENST00000498792 1227 ntBASIC16.72■□□□□ 0.27
LAMP1P11279 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LAMP1P11279 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LAMP1P11279 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.72■□□□□ 0.27
LAMP1P11279 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.72■□□□□ 0.27
LAMP1P11279 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LAMP1P11279 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LAMP1P11279 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LAMP1P11279 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LAMP1P11279 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.72■□□□□ 0.27
LAMP1P11279 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
LAMP1P11279 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LAMP1P11279 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LAMP1P11279 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LAMP1P11279 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.72■□□□□ 0.27
LAMP1P11279 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LAMP1P11279 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LAMP1P11279 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LAMP1P11279 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LAMP1P11279 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LAMP1P11279 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.71■□□□□ 0.27
LAMP1P11279 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LAMP1P11279 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LAMP1P11279 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LAMP1P11279 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LAMP1P11279 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.71■□□□□ 0.27
LAMP1P11279 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LAMP1P11279 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LAMP1P11279 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.71■□□□□ 0.27
LAMP1P11279 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LAMP1P11279 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LAMP1P11279 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LAMP1P11279 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LAMP1P11279 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LAMP1P11279 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LAMP1P11279 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LAMP1P11279 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LAMP1P11279 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LAMP1P11279 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LAMP1P11279 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LAMP1P11279 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.71■□□□□ 0.27
LAMP1P11279 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.71■□□□□ 0.27
LAMP1P11279 AC083849.1-201ENST00000615227 514 ntBASIC16.71■□□□□ 0.27
LAMP1P11279 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LAMP1P11279 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LAMP1P11279 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LAMP1P11279 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LAMP1P11279 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
LAMP1P11279 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
LAMP1P11279 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LAMP1P11279 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.7■□□□□ 0.26
LAMP1P11279 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LAMP1P11279 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.7■□□□□ 0.26
LAMP1P11279 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.7■□□□□ 0.26
LAMP1P11279 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LAMP1P11279 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LAMP1P11279 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms