Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 AC134043.2-201ENST00000624206 2238 ntBASIC14□□□□□ -0.17
PF4V1P10720 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14□□□□□ -0.17
PF4V1P10720 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14□□□□□ -0.17
PF4V1P10720 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14□□□□□ -0.17
PF4V1P10720 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PF4V1P10720 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PF4V1P10720 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14□□□□□ -0.17
PF4V1P10720 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PF4V1P10720 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 AL022342.1-201ENST00000400363 863 ntBASIC14□□□□□ -0.17
PF4V1P10720 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14□□□□□ -0.17
PF4V1P10720 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14□□□□□ -0.17
PF4V1P10720 PENK-208ENST00000523051 772 ntTSL 5 BASIC14□□□□□ -0.17
PF4V1P10720 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 AL591684.3-201ENST00000605187 298 ntBASIC14□□□□□ -0.17
PF4V1P10720 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14□□□□□ -0.17
PF4V1P10720 AP000997.3-201ENST00000623333 2250 ntBASIC14□□□□□ -0.17
PF4V1P10720 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
PF4V1P10720 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PF4V1P10720 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
PF4V1P10720 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14□□□□□ -0.17
PF4V1P10720 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PF4V1P10720 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PF4V1P10720 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
PF4V1P10720 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PF4V1P10720 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PF4V1P10720 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PF4V1P10720 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14□□□□□ -0.17
PF4V1P10720 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14□□□□□ -0.17
PF4V1P10720 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.99□□□□□ -0.17
PF4V1P10720 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.99□□□□□ -0.17
PF4V1P10720 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.99□□□□□ -0.17
PF4V1P10720 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PF4V1P10720 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.99□□□□□ -0.17
PF4V1P10720 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.99□□□□□ -0.17
PF4V1P10720 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.99□□□□□ -0.17
PF4V1P10720 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.99□□□□□ -0.17
PF4V1P10720 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PF4V1P10720 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PF4V1P10720 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.99□□□□□ -0.17
PF4V1P10720 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
PF4V1P10720 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PF4V1P10720 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
PF4V1P10720 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.99□□□□□ -0.17
PF4V1P10720 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PF4V1P10720 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PF4V1P10720 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PF4V1P10720 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PF4V1P10720 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
PF4V1P10720 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PF4V1P10720 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.99□□□□□ -0.17
PF4V1P10720 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.99□□□□□ -0.17
PF4V1P10720 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.99□□□□□ -0.17
PF4V1P10720 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.99□□□□□ -0.17
PF4V1P10720 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.99□□□□□ -0.17
PF4V1P10720 DUTP2-201ENST00000519164 463 ntBASIC13.99□□□□□ -0.17
PF4V1P10720 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PF4V1P10720 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PF4V1P10720 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.99□□□□□ -0.17
PF4V1P10720 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PF4V1P10720 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PF4V1P10720 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PF4V1P10720 FLJ13224-201ENST00000313737 1514 ntBASIC13.99□□□□□ -0.17
PF4V1P10720 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PF4V1P10720 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.99□□□□□ -0.17
PF4V1P10720 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PF4V1P10720 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.99□□□□□ -0.17
PF4V1P10720 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PF4V1P10720 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PF4V1P10720 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms