Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 AC120114.3-201ENST00000611923 658 ntBASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 FAM215A-202ENST00000632077 792 ntBASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRGAP2CP0DJJ0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
SRGAP2CP0DJJ0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SRGAP2CP0DJJ0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SRGAP2CP0DJJ0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SRGAP2CP0DJJ0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SRGAP2CP0DJJ0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 AL022342.1-201ENST00000400363 863 ntBASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 AC093909.1-201ENST00000504731 1122 ntBASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 AC025062.2-201ENST00000605477 670 ntBASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 AC019129.2-201ENST00000609837 1235 ntBASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 AL353593.2-201ENST00000602529 1483 ntBASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 AC132938.5-201ENST00000624980 1813 ntBASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SRGAP2CP0DJJ0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 RPS2P28-201ENST00000314255 741 ntBASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SRGAP2CP0DJJ0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms