Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.45□□□□□ -0.26
TCRAP04437 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
TCRAP04437 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
TCRAP04437 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TCRAP04437 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TCRAP04437 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TCRAP04437 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
TCRAP04437 KRT18P29-201ENST00000397031 1267 ntBASIC13.45□□□□□ -0.26
TCRAP04437 MIR935-201ENST00000401179 91 ntBASIC13.45□□□□□ -0.26
TCRAP04437 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.45□□□□□ -0.26
TCRAP04437 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.45□□□□□ -0.26
TCRAP04437 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.45□□□□□ -0.26
TCRAP04437 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.45□□□□□ -0.26
TCRAP04437 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.45□□□□□ -0.26
TCRAP04437 REXO1L10P-201ENST00000615707 1290 ntBASIC13.45□□□□□ -0.26
TCRAP04437 REXO1L12P-201ENST00000622156 912 ntBASIC13.45□□□□□ -0.26
TCRAP04437 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.45□□□□□ -0.26
TCRAP04437 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.45□□□□□ -0.26
TCRAP04437 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TCRAP04437 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
TCRAP04437 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.45□□□□□ -0.26
TCRAP04437 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.45□□□□□ -0.26
TCRAP04437 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TCRAP04437 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
TCRAP04437 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
TCRAP04437 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.45□□□□□ -0.26
TCRAP04437 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRAP04437 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TCRAP04437 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.44□□□□□ -0.26
TCRAP04437 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TCRAP04437 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.44□□□□□ -0.26
TCRAP04437 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.44□□□□□ -0.26
TCRAP04437 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.44□□□□□ -0.26
TCRAP04437 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.44□□□□□ -0.26
TCRAP04437 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.44□□□□□ -0.26
TCRAP04437 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 BX088651.1-201ENST00000540551 451 ntBASIC13.44□□□□□ -0.26
TCRAP04437 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TCRAP04437 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.44□□□□□ -0.26
TCRAP04437 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.44□□□□□ -0.26
TCRAP04437 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TCRAP04437 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TCRAP04437 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.44□□□□□ -0.26
TCRAP04437 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TCRAP04437 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRAP04437 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TCRAP04437 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TCRAP04437 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TCRAP04437 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TCRAP04437 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
TCRAP04437 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TCRAP04437 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TCRAP04437 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.43□□□□□ -0.26
TCRAP04437 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TCRAP04437 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TCRAP04437 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TCRAP04437 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TCRAP04437 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms