Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFAP04085 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFAP04085 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFAP04085 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PDGFAP04085 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFAP04085 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.51■□□□□ 0.23
PDGFAP04085 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFAP04085 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PDGFAP04085 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFAP04085 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
PDGFAP04085 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PDGFAP04085 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFAP04085 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFAP04085 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.51■□□□□ 0.23
PDGFAP04085 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.51■□□□□ 0.23
PDGFAP04085 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFAP04085 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFAP04085 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.51■□□□□ 0.23
PDGFAP04085 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.51■□□□□ 0.23
PDGFAP04085 KRT18P3-201ENST00000451602 1288 ntBASIC16.51■□□□□ 0.23
PDGFAP04085 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.51■□□□□ 0.23
PDGFAP04085 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.51■□□□□ 0.23
PDGFAP04085 AL139424.1-201ENST00000607572 797 ntBASIC16.51■□□□□ 0.23
PDGFAP04085 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PDGFAP04085 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFAP04085 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFAP04085 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFAP04085 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PDGFAP04085 MYLKP1-201ENST00000509077 1580 ntBASIC16.51■□□□□ 0.23
PDGFAP04085 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFAP04085 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.51■□□□□ 0.23
PDGFAP04085 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFAP04085 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.5■□□□□ 0.23
PDGFAP04085 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.5■□□□□ 0.23
PDGFAP04085 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.5■□□□□ 0.23
PDGFAP04085 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 LINC01126-201ENST00000623515 1646 ntBASIC16.5■□□□□ 0.23
PDGFAP04085 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 YBX2P1-201ENST00000394192 760 ntBASIC16.5■□□□□ 0.23
PDGFAP04085 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.5■□□□□ 0.23
PDGFAP04085 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.5■□□□□ 0.23
PDGFAP04085 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.5■□□□□ 0.23
PDGFAP04085 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.5■□□□□ 0.23
PDGFAP04085 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.5■□□□□ 0.23
PDGFAP04085 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.5■□□□□ 0.23
PDGFAP04085 AC008735.5-201ENST00000623544 497 ntBASIC16.5■□□□□ 0.23
PDGFAP04085 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.5■□□□□ 0.23
PDGFAP04085 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.5■□□□□ 0.23
PDGFAP04085 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PDGFAP04085 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PDGFAP04085 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.5■□□□□ 0.23
PDGFAP04085 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFAP04085 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
PDGFAP04085 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PDGFAP04085 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
PDGFAP04085 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFAP04085 AP002414.3-201ENST00000589352 1468 ntBASIC16.49■□□□□ 0.23
PDGFAP04085 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PDGFAP04085 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFAP04085 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PDGFAP04085 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PDGFAP04085 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PDGFAP04085 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFAP04085 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFAP04085 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.49■□□□□ 0.23
PDGFAP04085 RPS8P6-201ENST00000426177 609 ntBASIC16.49■□□□□ 0.23
PDGFAP04085 AL591424.1-201ENST00000442569 1213 ntBASIC16.49■□□□□ 0.23
PDGFAP04085 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.49■□□□□ 0.23
PDGFAP04085 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.49■□□□□ 0.23
PDGFAP04085 AC112482.1-201ENST00000492080 688 ntBASIC16.49■□□□□ 0.23
PDGFAP04085 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.49■□□□□ 0.23
PDGFAP04085 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.49■□□□□ 0.23
PDGFAP04085 AL499627.1-201ENST00000569373 2188 ntBASIC16.49■□□□□ 0.23
PDGFAP04085 NKAPP1-205ENST00000585790 367 ntBASIC16.49■□□□□ 0.23
PDGFAP04085 AP001160.2-201ENST00000596071 487 ntBASIC16.49■□□□□ 0.23
PDGFAP04085 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFAP04085 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms