Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6AP02538 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT6AP02538 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.12■□□□□ 0.33
KRT6AP02538 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6AP02538 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
KRT6AP02538 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6AP02538 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6AP02538 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
KRT6AP02538 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6AP02538 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6AP02538 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.12■□□□□ 0.33
KRT6AP02538 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.12■□□□□ 0.33
KRT6AP02538 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.12■□□□□ 0.33
KRT6AP02538 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6AP02538 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT6AP02538 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6AP02538 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.12■□□□□ 0.33
KRT6AP02538 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6AP02538 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT6AP02538 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.12■□□□□ 0.33
KRT6AP02538 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.12■□□□□ 0.33
KRT6AP02538 LINC01023-201ENST00000606054 436 ntBASIC17.12■□□□□ 0.33
KRT6AP02538 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
KRT6AP02538 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6AP02538 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6AP02538 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6AP02538 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6AP02538 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6AP02538 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT6AP02538 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6AP02538 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6AP02538 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT6AP02538 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.12■□□□□ 0.33
KRT6AP02538 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6AP02538 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
KRT6AP02538 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6AP02538 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6AP02538 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6AP02538 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
KRT6AP02538 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6AP02538 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
KRT6AP02538 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6AP02538 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT6AP02538 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT6AP02538 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT6AP02538 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6AP02538 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6AP02538 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6AP02538 MTCL1P1-201ENST00000446207 792 ntBASIC17.11■□□□□ 0.33
KRT6AP02538 AC112907.2-201ENST00000448639 330 ntBASIC17.11■□□□□ 0.33
KRT6AP02538 KRT18P38-201ENST00000449496 1282 ntBASIC17.11■□□□□ 0.33
KRT6AP02538 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT6AP02538 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT6AP02538 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6AP02538 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6AP02538 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
KRT6AP02538 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT6AP02538 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.11■□□□□ 0.33
KRT6AP02538 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT6AP02538 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6AP02538 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.11■□□□□ 0.33
KRT6AP02538 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6AP02538 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6AP02538 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
KRT6AP02538 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6AP02538 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6AP02538 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6AP02538 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6AP02538 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6AP02538 CROCCP2-202ENST00000412962 2773 ntBASIC17.11■□□□□ 0.33
KRT6AP02538 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6AP02538 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6AP02538 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT6AP02538 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT6AP02538 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT6AP02538 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT6AP02538 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT6AP02538 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
KRT6AP02538 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT6AP02538 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT6AP02538 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT6AP02538 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.1■□□□□ 0.33
KRT6AP02538 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT6AP02538 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT6AP02538 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT6AP02538 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT6AP02538 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT6AP02538 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.1■□□□□ 0.33
KRT6AP02538 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT6AP02538 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT6AP02538 AC211429.1-201ENST00000415277 523 ntBASIC17.1■□□□□ 0.33
KRT6AP02538 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT6AP02538 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT6AP02538 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.1■□□□□ 0.33
KRT6AP02538 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT6AP02538 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT6AP02538 AC006011.2-201ENST00000621313 1158 ntBASIC17.1■□□□□ 0.33
KRT6AP02538 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KRT6AP02538 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.1■□□□□ 0.33
KRT6AP02538 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms