Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 GAMT-205ENST00000640762 751 ntTSL 5 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.3□□□□□ -0.28
HLA-DQA1P01909 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 AC126755.1-201ENST00000525846 6405 ntBASIC13.29□□□□□ -0.28
HLA-DQA1P01909 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 AC092068.3-201ENST00000587894 2016 ntBASIC13.29□□□□□ -0.28
HLA-DQA1P01909 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 POU5F1P3-201ENST00000428824 1078 ntBASIC13.29□□□□□ -0.28
HLA-DQA1P01909 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 AC005915.1-201ENST00000624912 2018 ntBASIC13.29□□□□□ -0.28
HLA-DQA1P01909 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HLA-DQA1P01909 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HLA-DQA1P01909 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA1P01909 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA1P01909 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-DQA1P01909 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA1P01909 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HLA-DQA1P01909 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HLA-DQA1P01909 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA1P01909 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA1P01909 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-DQA1P01909 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-DQA1P01909 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA1P01909 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DQA1P01909 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-DQA1P01909 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC13.28□□□□□ -0.28
HLA-DQA1P01909 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.28□□□□□ -0.28
HLA-DQA1P01909 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-DQA1P01909 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.28□□□□□ -0.28
HLA-DQA1P01909 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms