Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
IFNA1P01562 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 MIR564-202ENST00000385049 94 ntBASIC13.99□□□□□ -0.17
IFNA1P01562 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.99□□□□□ -0.17
IFNA1P01562 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.99□□□□□ -0.17
IFNA1P01562 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.99□□□□□ -0.17
IFNA1P01562 LINC02199-201ENST00000506655 2702 ntBASIC13.99□□□□□ -0.17
IFNA1P01562 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.99□□□□□ -0.17
IFNA1P01562 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.99□□□□□ -0.17
IFNA1P01562 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
IFNA1P01562 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.99□□□□□ -0.17
IFNA1P01562 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
IFNA1P01562 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFNA1P01562 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
IFNA1P01562 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.98□□□□□ -0.17
IFNA1P01562 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.98□□□□□ -0.17
IFNA1P01562 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
IFNA1P01562 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFNA1P01562 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
IFNA1P01562 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFNA1P01562 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFNA1P01562 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFNA1P01562 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFNA1P01562 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
IFNA1P01562 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFNA1P01562 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
IFNA1P01562 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFNA1P01562 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.98□□□□□ -0.17
IFNA1P01562 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
IFNA1P01562 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.98□□□□□ -0.17
IFNA1P01562 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
IFNA1P01562 Z85996.1-201ENST00000494644 937 ntBASIC13.98□□□□□ -0.17
IFNA1P01562 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
IFNA1P01562 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC13.98□□□□□ -0.17
IFNA1P01562 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC13.98□□□□□ -0.17
IFNA1P01562 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC13.98□□□□□ -0.17
IFNA1P01562 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
IFNA1P01562 AC004264.1-201ENST00000608354 794 ntBASIC13.98□□□□□ -0.17
IFNA1P01562 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
IFNA1P01562 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFNA1P01562 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.98□□□□□ -0.17
IFNA1P01562 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC13.98□□□□□ -0.17
IFNA1P01562 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC13.98□□□□□ -0.17
IFNA1P01562 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFNA1P01562 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
IFNA1P01562 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.98□□□□□ -0.17
IFNA1P01562 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
IFNA1P01562 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFNA1P01562 AC060834.1-201ENST00000443027 2032 ntBASIC13.98□□□□□ -0.17
IFNA1P01562 SDHAP2-201ENST00000455183 2001 ntBASIC13.98□□□□□ -0.17
IFNA1P01562 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFNA1P01562 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
IFNA1P01562 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFNA1P01562 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.98□□□□□ -0.17
IFNA1P01562 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
IFNA1P01562 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.98□□□□□ -0.17
IFNA1P01562 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
IFNA1P01562 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFNA1P01562 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IFNA1P01562 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFNA1P01562 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.98□□□□□ -0.17
IFNA1P01562 AC016396.2-201ENST00000562575 1417 ntBASIC13.98□□□□□ -0.17
IFNA1P01562 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.98□□□□□ -0.17
IFNA1P01562 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFNA1P01562 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFNA1P01562 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.98□□□□□ -0.17
IFNA1P01562 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
IFNA1P01562 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFNA1P01562 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.97□□□□□ -0.17
IFNA1P01562 AC022898.2-201ENST00000616822 1312 ntBASIC13.97□□□□□ -0.17
IFNA1P01562 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IFNA1P01562 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
IFNA1P01562 AL513523.2-202ENST00000427283 2040 ntBASIC13.97□□□□□ -0.17
IFNA1P01562 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFNA1P01562 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFNA1P01562 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFNA1P01562 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFNA1P01562 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFNA1P01562 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFNA1P01562 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
IFNA1P01562 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFNA1P01562 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms