Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPTM1O96005 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLPTM1O96005 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLPTM1O96005 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLPTM1O96005 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.71■□□□□ 0.27
CLPTM1O96005 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLPTM1O96005 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.71■□□□□ 0.27
CLPTM1O96005 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CLPTM1O96005 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.71■□□□□ 0.27
CLPTM1O96005 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.71■□□□□ 0.27
CLPTM1O96005 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLPTM1O96005 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLPTM1O96005 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.71■□□□□ 0.27
CLPTM1O96005 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLPTM1O96005 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLPTM1O96005 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.71■□□□□ 0.27
CLPTM1O96005 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLPTM1O96005 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.71■□□□□ 0.27
CLPTM1O96005 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLPTM1O96005 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.71■□□□□ 0.27
CLPTM1O96005 SNORA78-201ENST00000459373 127 ntBASIC16.71■□□□□ 0.27
CLPTM1O96005 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.71■□□□□ 0.27
CLPTM1O96005 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLPTM1O96005 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLPTM1O96005 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.71■□□□□ 0.27
CLPTM1O96005 AC113410.3-201ENST00000623366 203 ntBASIC16.71■□□□□ 0.27
CLPTM1O96005 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLPTM1O96005 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
CLPTM1O96005 KRT8P32-201ENST00000512863 1461 ntBASIC16.71■□□□□ 0.27
CLPTM1O96005 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.71■□□□□ 0.27
CLPTM1O96005 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLPTM1O96005 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLPTM1O96005 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CLPTM1O96005 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLPTM1O96005 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLPTM1O96005 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CLPTM1O96005 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CLPTM1O96005 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CLPTM1O96005 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLPTM1O96005 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLPTM1O96005 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLPTM1O96005 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CLPTM1O96005 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CLPTM1O96005 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLPTM1O96005 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
CLPTM1O96005 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.7■□□□□ 0.26
CLPTM1O96005 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLPTM1O96005 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.7■□□□□ 0.26
CLPTM1O96005 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLPTM1O96005 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.7■□□□□ 0.26
CLPTM1O96005 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLPTM1O96005 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLPTM1O96005 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLPTM1O96005 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLPTM1O96005 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLPTM1O96005 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLPTM1O96005 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CLPTM1O96005 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CLPTM1O96005 AL353807.1-201ENST00000427475 662 ntBASIC16.7■□□□□ 0.26
CLPTM1O96005 TSPY7P-201ENST00000431358 1114 ntBASIC16.7■□□□□ 0.26
CLPTM1O96005 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLPTM1O96005 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLPTM1O96005 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLPTM1O96005 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.7■□□□□ 0.26
CLPTM1O96005 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.7■□□□□ 0.26
CLPTM1O96005 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLPTM1O96005 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.7■□□□□ 0.26
CLPTM1O96005 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.7■□□□□ 0.26
CLPTM1O96005 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.7■□□□□ 0.26
CLPTM1O96005 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CLPTM1O96005 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.7■□□□□ 0.26
CLPTM1O96005 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.7■□□□□ 0.26
CLPTM1O96005 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLPTM1O96005 AC007950.2-201ENST00000615045 2347 ntBASIC16.7■□□□□ 0.26
CLPTM1O96005 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLPTM1O96005 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLPTM1O96005 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLPTM1O96005 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.7■□□□□ 0.26
CLPTM1O96005 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLPTM1O96005 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CLPTM1O96005 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLPTM1O96005 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.69■□□□□ 0.26
CLPTM1O96005 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLPTM1O96005 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLPTM1O96005 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.69■□□□□ 0.26
CLPTM1O96005 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLPTM1O96005 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CLPTM1O96005 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLPTM1O96005 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CLPTM1O96005 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.69■□□□□ 0.26
CLPTM1O96005 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CLPTM1O96005 FAM197Y1-201ENST00000421178 764 ntBASIC16.69■□□□□ 0.26
CLPTM1O96005 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.69■□□□□ 0.26
CLPTM1O96005 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.69■□□□□ 0.26
CLPTM1O96005 AP001412.1-201ENST00000608405 714 ntBASIC16.69■□□□□ 0.26
CLPTM1O96005 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLPTM1O96005 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLPTM1O96005 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.69■□□□□ 0.26
CLPTM1O96005 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.69■□□□□ 0.26
CLPTM1O96005 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms