Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
CLDN1O95832 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN1O95832 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN1O95832 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CLDN1O95832 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN1O95832 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN1O95832 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN1O95832 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CLDN1O95832 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN1O95832 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN1O95832 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN1O95832 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN1O95832 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN1O95832 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN1O95832 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN1O95832 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.75■□□□□ 0.11
CLDN1O95832 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN1O95832 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN1O95832 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CLDN1O95832 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN1O95832 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLDN1O95832 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.75■□□□□ 0.11
CLDN1O95832 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN1O95832 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLDN1O95832 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN1O95832 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
CLDN1O95832 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.75■□□□□ 0.11
CLDN1O95832 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN1O95832 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.75■□□□□ 0.11
CLDN1O95832 AC092474.2-201ENST00000424288 719 ntBASIC15.75■□□□□ 0.11
CLDN1O95832 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN1O95832 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN1O95832 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN1O95832 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.75■□□□□ 0.11
CLDN1O95832 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN1O95832 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN1O95832 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.75■□□□□ 0.11
CLDN1O95832 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.75■□□□□ 0.11
CLDN1O95832 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.75■□□□□ 0.11
CLDN1O95832 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.75■□□□□ 0.11
CLDN1O95832 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.75■□□□□ 0.11
CLDN1O95832 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN1O95832 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN1O95832 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN1O95832 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN1O95832 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN1O95832 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN1O95832 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN1O95832 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN1O95832 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN1O95832 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN1O95832 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLDN1O95832 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN1O95832 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN1O95832 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CLDN1O95832 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CLDN1O95832 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN1O95832 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
CLDN1O95832 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
CLDN1O95832 AC007613.1-201ENST00000572811 2597 ntBASIC15.75■□□□□ 0.11
CLDN1O95832 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN1O95832 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN1O95832 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN1O95832 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN1O95832 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CLDN1O95832 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLDN1O95832 FEM1AP3-201ENST00000403722 1741 ntBASIC15.74■□□□□ 0.11
CLDN1O95832 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
CLDN1O95832 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.74■□□□□ 0.11
CLDN1O95832 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.74■□□□□ 0.11
CLDN1O95832 AC026471.1-201ENST00000564629 3026 ntBASIC15.74■□□□□ 0.11
CLDN1O95832 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN1O95832 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN1O95832 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CLDN1O95832 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN1O95832 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN1O95832 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN1O95832 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN1O95832 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN1O95832 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN1O95832 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CLDN1O95832 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN1O95832 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN1O95832 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.74■□□□□ 0.11
CLDN1O95832 AC073621.1-201ENST00000392730 636 ntBASIC15.74■□□□□ 0.11
CLDN1O95832 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLDN1O95832 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.74■□□□□ 0.11
CLDN1O95832 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN1O95832 CEND1P1-201ENST00000451006 455 ntBASIC15.74■□□□□ 0.11
CLDN1O95832 BX005266.1-201ENST00000473402 457 ntBASIC15.74■□□□□ 0.11
CLDN1O95832 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.74■□□□□ 0.11
CLDN1O95832 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN1O95832 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.74■□□□□ 0.11
CLDN1O95832 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CLDN1O95832 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN1O95832 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CLDN1O95832 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN1O95832 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLDN1O95832 ELL2P1-201ENST00000413990 1906 ntBASIC15.74■□□□□ 0.11
CLDN1O95832 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms