Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
BEST1O76090 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.49■□□□□ 0.55
BEST1O76090 SIGLEC16-201ENST00000599858 1437 ntBASIC18.49■□□□□ 0.55
BEST1O76090 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BEST1O76090 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
BEST1O76090 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
BEST1O76090 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.49■□□□□ 0.55
BEST1O76090 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
BEST1O76090 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
BEST1O76090 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
BEST1O76090 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BEST1O76090 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.49■□□□□ 0.55
BEST1O76090 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
BEST1O76090 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
BEST1O76090 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BEST1O76090 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
BEST1O76090 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BEST1O76090 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.49■□□□□ 0.55
BEST1O76090 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.49■□□□□ 0.55
BEST1O76090 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.49■□□□□ 0.55
BEST1O76090 SCARNA2-201ENST00000458748 420 ntBASIC18.49■□□□□ 0.55
BEST1O76090 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.49■□□□□ 0.55
BEST1O76090 IGHV3-52-201ENST00000519770 353 ntBASIC18.49■□□□□ 0.55
BEST1O76090 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.49■□□□□ 0.55
BEST1O76090 AL049840.3-201ENST00000602669 611 ntBASIC18.49■□□□□ 0.55
BEST1O76090 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BEST1O76090 AL139288.1-201ENST00000623748 933 ntBASIC18.49■□□□□ 0.55
BEST1O76090 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BEST1O76090 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
BEST1O76090 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BEST1O76090 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
BEST1O76090 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
BEST1O76090 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
BEST1O76090 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BEST1O76090 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.49■□□□□ 0.55
BEST1O76090 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
BEST1O76090 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BEST1O76090 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
BEST1O76090 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BEST1O76090 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
BEST1O76090 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BEST1O76090 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BEST1O76090 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BEST1O76090 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BEST1O76090 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BEST1O76090 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BEST1O76090 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
BEST1O76090 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
BEST1O76090 KLF4P1-201ENST00000412782 1185 ntBASIC18.48■□□□□ 0.55
BEST1O76090 RPS2P1-201ENST00000434010 821 ntBASIC18.48■□□□□ 0.55
BEST1O76090 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BEST1O76090 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
BEST1O76090 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
BEST1O76090 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.48■□□□□ 0.55
BEST1O76090 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.48■□□□□ 0.55
BEST1O76090 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.48■□□□□ 0.55
BEST1O76090 MTDHP4-201ENST00000600287 670 ntBASIC18.48■□□□□ 0.55
BEST1O76090 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.48■□□□□ 0.55
BEST1O76090 LINC01451-201ENST00000623792 534 ntBASIC18.48■□□□□ 0.55
BEST1O76090 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
BEST1O76090 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BEST1O76090 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.48■□□□□ 0.55
BEST1O76090 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.48■□□□□ 0.55
BEST1O76090 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.48■□□□□ 0.55
BEST1O76090 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.48■□□□□ 0.55
BEST1O76090 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
BEST1O76090 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BEST1O76090 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
BEST1O76090 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BEST1O76090 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.48■□□□□ 0.55
BEST1O76090 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
BEST1O76090 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BEST1O76090 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
BEST1O76090 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BEST1O76090 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BEST1O76090 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BEST1O76090 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BEST1O76090 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BEST1O76090 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BEST1O76090 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BEST1O76090 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BEST1O76090 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.47■□□□□ 0.55
BEST1O76090 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
BEST1O76090 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
BEST1O76090 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.47■□□□□ 0.55
BEST1O76090 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
BEST1O76090 AL020989.1-201ENST00000422979 469 ntBASIC18.47■□□□□ 0.55
BEST1O76090 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BEST1O76090 AF186996.4-201ENST00000467186 377 ntBASIC18.47■□□□□ 0.55
BEST1O76090 AC073648.2-201ENST00000510116 352 ntBASIC18.47■□□□□ 0.55
BEST1O76090 STK19B-204ENST00000512515 211 ntBASIC18.47■□□□□ 0.55
BEST1O76090 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.47■□□□□ 0.55
BEST1O76090 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.47■□□□□ 0.55
BEST1O76090 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.47■□□□□ 0.55
BEST1O76090 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BEST1O76090 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
BEST1O76090 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
BEST1O76090 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
BEST1O76090 HLA-J-201ENST00000462773 1622 ntBASIC18.46■□□□□ 0.55
BEST1O76090 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms