Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 AC009949.1-201ENST00000623048 1830 ntBASIC16.66■□□□□ 0.26
PLOD3O60568 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PLOD3O60568 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.66■□□□□ 0.26
PLOD3O60568 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.66■□□□□ 0.26
PLOD3O60568 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PLOD3O60568 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 AL353801.3-201ENST00000609898 542 ntBASIC16.66■□□□□ 0.26
PLOD3O60568 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
PLOD3O60568 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.66■□□□□ 0.26
PLOD3O60568 AC009053.2-201ENST00000563701 2365 ntBASIC16.66■□□□□ 0.26
PLOD3O60568 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.66■□□□□ 0.26
PLOD3O60568 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.66■□□□□ 0.26
PLOD3O60568 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
PLOD3O60568 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 PCED1CP-201ENST00000419887 785 ntBASIC16.65■□□□□ 0.26
PLOD3O60568 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.65■□□□□ 0.26
PLOD3O60568 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.65■□□□□ 0.26
PLOD3O60568 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.65■□□□□ 0.26
PLOD3O60568 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.65■□□□□ 0.26
PLOD3O60568 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.65■□□□□ 0.26
PLOD3O60568 AL121672.3-201ENST00000608644 468 ntBASIC16.65■□□□□ 0.26
PLOD3O60568 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 AL592071.1-201ENST00000611956 408 ntBASIC16.65■□□□□ 0.26
PLOD3O60568 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.65■□□□□ 0.26
PLOD3O60568 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.65■□□□□ 0.26
PLOD3O60568 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PLOD3O60568 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PLOD3O60568 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PLOD3O60568 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.65■□□□□ 0.26
PLOD3O60568 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.65■□□□□ 0.26
PLOD3O60568 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.65■□□□□ 0.26
PLOD3O60568 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PLOD3O60568 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PLOD3O60568 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PLOD3O60568 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PLOD3O60568 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.64■□□□□ 0.25
PLOD3O60568 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PLOD3O60568 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.64■□□□□ 0.25
PLOD3O60568 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PLOD3O60568 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PLOD3O60568 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PLOD3O60568 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PLOD3O60568 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PLOD3O60568 BX276092.5-203ENST00000456199 560 ntBASIC16.64■□□□□ 0.25
PLOD3O60568 KRT18P35-201ENST00000510488 1269 ntBASIC16.64■□□□□ 0.25
PLOD3O60568 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PLOD3O60568 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PLOD3O60568 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PLOD3O60568 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PLOD3O60568 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.64■□□□□ 0.25
PLOD3O60568 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.64■□□□□ 0.25
PLOD3O60568 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PLOD3O60568 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.64■□□□□ 0.25
PLOD3O60568 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PLOD3O60568 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PLOD3O60568 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PLOD3O60568 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.64■□□□□ 0.25
PLOD3O60568 AC097374.2-201ENST00000618617 1306 ntBASIC16.64■□□□□ 0.25
PLOD3O60568 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PLOD3O60568 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PLOD3O60568 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.64■□□□□ 0.25
PLOD3O60568 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms