Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNCRIPO60506 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.05■□□□□ 0.48
SYNCRIPO60506 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 AC020916.1-201ENST00000587762 1774 ntBASIC18.04■□□□□ 0.48
SYNCRIPO60506 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNCRIPO60506 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
SYNCRIPO60506 AC243591.1-201ENST00000452967 1364 ntBASIC18.04■□□□□ 0.48
SYNCRIPO60506 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNCRIPO60506 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
SYNCRIPO60506 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNCRIPO60506 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNCRIPO60506 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SYNCRIPO60506 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.03■□□□□ 0.48
SYNCRIPO60506 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.03■□□□□ 0.48
SYNCRIPO60506 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNCRIPO60506 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
SYNCRIPO60506 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.03■□□□□ 0.48
SYNCRIPO60506 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNCRIPO60506 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SYNCRIPO60506 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SYNCRIPO60506 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SYNCRIPO60506 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SYNCRIPO60506 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNCRIPO60506 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNCRIPO60506 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNCRIPO60506 AC007967.3-201ENST00000434308 558 ntBASIC18.03■□□□□ 0.48
SYNCRIPO60506 HNRNPDP1-201ENST00000439535 754 ntBASIC18.03■□□□□ 0.48
SYNCRIPO60506 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.03■□□□□ 0.48
SYNCRIPO60506 SLC25A1P1-201ENST00000528351 927 ntBASIC18.03■□□□□ 0.48
SYNCRIPO60506 SART3-203ENST00000546611 1184 ntBASIC18.03■□□□□ 0.48
SYNCRIPO60506 AC021087.4-201ENST00000563761 564 ntBASIC18.03■□□□□ 0.48
SYNCRIPO60506 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.03■□□□□ 0.48
SYNCRIPO60506 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.03■□□□□ 0.48
SYNCRIPO60506 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
SYNCRIPO60506 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.03■□□□□ 0.48
SYNCRIPO60506 AL049840.3-201ENST00000602669 611 ntBASIC18.03■□□□□ 0.48
SYNCRIPO60506 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.03■□□□□ 0.48
SYNCRIPO60506 AL139288.1-201ENST00000623748 933 ntBASIC18.03■□□□□ 0.48
SYNCRIPO60506 AC117500.6-201ENST00000624871 588 ntBASIC18.03■□□□□ 0.48
SYNCRIPO60506 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNCRIPO60506 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.03■□□□□ 0.48
SYNCRIPO60506 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.03■□□□□ 0.48
SYNCRIPO60506 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.02■□□□□ 0.48
SYNCRIPO60506 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SYNCRIPO60506 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
SYNCRIPO60506 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SYNCRIPO60506 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SYNCRIPO60506 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SYNCRIPO60506 PHGDH-209ENST00000641074 1780 ntBASIC18.02■□□□□ 0.48
SYNCRIPO60506 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SYNCRIPO60506 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SYNCRIPO60506 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
SYNCRIPO60506 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SYNCRIPO60506 MIR574-201ENST00000385209 96 ntBASIC18.02■□□□□ 0.48
SYNCRIPO60506 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms