Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC132938.6-201ENST00000623828 1655 ntBASIC21.32■■□□□ 1
GRIN3BO60391 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.32■■□□□ 1
GRIN3BO60391 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GRIN3BO60391 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.32■■□□□ 1
GRIN3BO60391 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
GRIN3BO60391 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC21.32■■□□□ 1
GRIN3BO60391 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.32■■□□□ 1
GRIN3BO60391 LINC01225-203ENST00000563550 1244 ntBASIC21.32■■□□□ 1
GRIN3BO60391 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
GRIN3BO60391 GPER1-207ENST00000619052 571 ntTSL 2 BASIC21.32■■□□□ 1
GRIN3BO60391 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GRIN3BO60391 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
GRIN3BO60391 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.32■■□□□ 1
GRIN3BO60391 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
GRIN3BO60391 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GRIN3BO60391 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.31■■□□□ 1
GRIN3BO60391 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GRIN3BO60391 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
GRIN3BO60391 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GRIN3BO60391 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC21.31■■□□□ 1
GRIN3BO60391 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
GRIN3BO60391 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GRIN3BO60391 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GRIN3BO60391 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC21.31■■□□□ 1
GRIN3BO60391 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC21.31■■□□□ 1
GRIN3BO60391 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
GRIN3BO60391 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC21.31■■□□□ 1
GRIN3BO60391 GATD1-206ENST00000526325 756 ntTSL 5 BASIC21.31■■□□□ 1
GRIN3BO60391 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
GRIN3BO60391 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.31■■□□□ 1
GRIN3BO60391 AL645728.2-201ENST00000641974 660 ntBASIC21.31■■□□□ 1
GRIN3BO60391 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
GRIN3BO60391 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GRIN3BO60391 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.31■■□□□ 1
GRIN3BO60391 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.31■■□□□ 1
GRIN3BO60391 AC022144.1-201ENST00000602255 1580 ntBASIC21.31■■□□□ 1
GRIN3BO60391 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.31■■□□□ 1
GRIN3BO60391 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
GRIN3BO60391 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC21.3■■□□□ 1
GRIN3BO60391 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
GRIN3BO60391 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
GRIN3BO60391 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
GRIN3BO60391 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
GRIN3BO60391 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.3■■□□□ 1
GRIN3BO60391 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.3■■□□□ 1
GRIN3BO60391 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
GRIN3BO60391 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC21.3■■□□□ 1
GRIN3BO60391 MIR658-201ENST00000385210 100 ntBASIC21.3■■□□□ 1
GRIN3BO60391 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
GRIN3BO60391 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
GRIN3BO60391 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.3■■□□□ 1
GRIN3BO60391 FAM8A2P-201ENST00000528813 1142 ntBASIC21.3■■□□□ 1
GRIN3BO60391 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.3■■□□□ 1
GRIN3BO60391 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC21.3■■□□□ 1
GRIN3BO60391 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC21.3■■□□□ 1
GRIN3BO60391 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.3■■□□□ 1
GRIN3BO60391 ARL16-202ENST00000570561 768 ntTSL 2 BASIC21.3■■□□□ 1
GRIN3BO60391 AL590560.3-201ENST00000623350 461 ntBASIC21.3■■□□□ 1
GRIN3BO60391 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GRIN3BO60391 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GRIN3BO60391 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
GRIN3BO60391 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC21.3■■□□□ 1
GRIN3BO60391 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
GRIN3BO60391 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
GRIN3BO60391 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GRIN3BO60391 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC21.29■■□□□ 1
GRIN3BO60391 AC100757.3-201ENST00000622361 1406 ntBASIC21.29■■□□□ 1
GRIN3BO60391 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.29■■□□□ 1
GRIN3BO60391 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.29■■□□□ 1
GRIN3BO60391 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
GRIN3BO60391 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.29■■□□□ 1
GRIN3BO60391 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GRIN3BO60391 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.29■■□□□ 1
GRIN3BO60391 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GRIN3BO60391 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.29■■□□□ 1
GRIN3BO60391 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
GRIN3BO60391 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC21.29■■□□□ 1
GRIN3BO60391 MIR4525-201ENST00000580000 75 ntBASIC21.29■■□□□ 1
GRIN3BO60391 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.29■■□□□ 1
GRIN3BO60391 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC21.29■■□□□ 1
GRIN3BO60391 COQ4-205ENST00000609948 956 ntTSL 2 BASIC21.29■■□□□ 1
GRIN3BO60391 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC21.29■■□□□ 1
GRIN3BO60391 AL161645.1-201ENST00000622716 1255 ntBASIC21.29■■□□□ 1
GRIN3BO60391 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
GRIN3BO60391 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GRIN3BO60391 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
GRIN3BO60391 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.29■■□□□ 1
GRIN3BO60391 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
GRIN3BO60391 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
GRIN3BO60391 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.28■■□□□ 1
GRIN3BO60391 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.28■■□□□ 1
GRIN3BO60391 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.28■■□□□ 1
GRIN3BO60391 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC21.28■■□□□ 1
GRIN3BO60391 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
GRIN3BO60391 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
GRIN3BO60391 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GRIN3BO60391 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC21.28■■□□□ 1
GRIN3BO60391 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.28■■□□□ 1
GRIN3BO60391 NME6-203ENST00000415644 849 ntTSL 2 BASIC21.28■■□□□ 1
GRIN3BO60391 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms