Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.16■□□□□ 0.02
SSX5O60225 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSX5O60225 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSX5O60225 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.16■□□□□ 0.02
SSX5O60225 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSX5O60225 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.16■□□□□ 0.02
SSX5O60225 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSX5O60225 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSX5O60225 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.16■□□□□ 0.02
SSX5O60225 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSX5O60225 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SSX5O60225 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSX5O60225 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSX5O60225 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SSX5O60225 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.15■□□□□ 0.02
SSX5O60225 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SSX5O60225 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.15■□□□□ 0.02
SSX5O60225 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.15■□□□□ 0.02
SSX5O60225 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.15■□□□□ 0.02
SSX5O60225 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.15■□□□□ 0.02
SSX5O60225 NUDT16P1-203ENST00000513809 620 ntBASIC15.15■□□□□ 0.02
SSX5O60225 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
SSX5O60225 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.15■□□□□ 0.02
SSX5O60225 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.15■□□□□ 0.02
SSX5O60225 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.15■□□□□ 0.02
SSX5O60225 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.15■□□□□ 0.02
SSX5O60225 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.15■□□□□ 0.02
SSX5O60225 WWOX-216ENST00000569818 525 ntBASIC15.15■□□□□ 0.02
SSX5O60225 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.15■□□□□ 0.02
SSX5O60225 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.15■□□□□ 0.02
SSX5O60225 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.15■□□□□ 0.02
SSX5O60225 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
SSX5O60225 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.15■□□□□ 0.02
SSX5O60225 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
SSX5O60225 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.15■□□□□ 0.02
SSX5O60225 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSX5O60225 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.14■□□□□ 0.02
SSX5O60225 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SSX5O60225 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.14■□□□□ 0.01
SSX5O60225 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 AL662844.4-201ENST00000606367 2838 ntBASIC15.14■□□□□ 0.01
SSX5O60225 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SSX5O60225 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.14■□□□□ 0.01
SSX5O60225 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.14■□□□□ 0.01
SSX5O60225 CRYGFP-201ENST00000418459 633 ntBASIC15.14■□□□□ 0.01
SSX5O60225 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.14■□□□□ 0.01
SSX5O60225 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.14■□□□□ 0.01
SSX5O60225 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.14■□□□□ 0.01
SSX5O60225 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.14■□□□□ 0.01
SSX5O60225 MIR3180-4-201ENST00000582223 153 ntBASIC15.14■□□□□ 0.01
SSX5O60225 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
SSX5O60225 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.14■□□□□ 0.01
SSX5O60225 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
SSX5O60225 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SSX5O60225 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SSX5O60225 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms