Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.71■□□□□ 0.43
PFDN6O15212 AL136038.3-201ENST00000561909 1096 ntBASIC17.71■□□□□ 0.43
PFDN6O15212 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.71■□□□□ 0.43
PFDN6O15212 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PFDN6O15212 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PFDN6O15212 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PFDN6O15212 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.71■□□□□ 0.43
PFDN6O15212 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PFDN6O15212 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PFDN6O15212 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PFDN6O15212 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PFDN6O15212 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
PFDN6O15212 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PFDN6O15212 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PFDN6O15212 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PFDN6O15212 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.7■□□□□ 0.42
PFDN6O15212 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN6O15212 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN6O15212 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN6O15212 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN6O15212 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN6O15212 KRT8P47-201ENST00000604727 1398 ntBASIC17.7■□□□□ 0.42
PFDN6O15212 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN6O15212 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN6O15212 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN6O15212 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.7■□□□□ 0.42
PFDN6O15212 AC090616.6-201ENST00000582640 721 ntBASIC17.7■□□□□ 0.42
PFDN6O15212 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN6O15212 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.7■□□□□ 0.42
PFDN6O15212 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.7■□□□□ 0.42
PFDN6O15212 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN6O15212 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.7■□□□□ 0.42
PFDN6O15212 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PFDN6O15212 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN6O15212 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PFDN6O15212 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN6O15212 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN6O15212 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN6O15212 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN6O15212 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PFDN6O15212 HLA-J-201ENST00000462773 1622 ntBASIC17.69■□□□□ 0.42
PFDN6O15212 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN6O15212 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN6O15212 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PFDN6O15212 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN6O15212 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PFDN6O15212 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN6O15212 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PFDN6O15212 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN6O15212 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN6O15212 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.69■□□□□ 0.42
PFDN6O15212 TSPY22P-201ENST00000427496 604 ntBASIC17.69■□□□□ 0.42
PFDN6O15212 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.69■□□□□ 0.42
PFDN6O15212 AL121956.5-201ENST00000625261 221 ntBASIC17.69■□□□□ 0.42
PFDN6O15212 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN6O15212 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN6O15212 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN6O15212 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN6O15212 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN6O15212 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN6O15212 AC012313.1-201ENST00000593393 3059 ntBASIC17.69■□□□□ 0.42
PFDN6O15212 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN6O15212 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.69■□□□□ 0.42
PFDN6O15212 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN6O15212 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN6O15212 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PFDN6O15212 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN6O15212 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN6O15212 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
PFDN6O15212 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PFDN6O15212 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.69■□□□□ 0.42
PFDN6O15212 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN6O15212 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN6O15212 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN6O15212 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PFDN6O15212 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN6O15212 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.68■□□□□ 0.42
PFDN6O15212 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN6O15212 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN6O15212 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN6O15212 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN6O15212 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN6O15212 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN6O15212 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN6O15212 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PFDN6O15212 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN6O15212 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.68■□□□□ 0.42
PFDN6O15212 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN6O15212 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN6O15212 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN6O15212 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN6O15212 AL355312.1-201ENST00000407115 2176 ntBASIC17.68■□□□□ 0.42
PFDN6O15212 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.68■□□□□ 0.42
PFDN6O15212 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.68■□□□□ 0.42
PFDN6O15212 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN6O15212 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.68■□□□□ 0.42
PFDN6O15212 RNF126P1-202ENST00000569893 925 ntBASIC17.68■□□□□ 0.42
PFDN6O15212 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
PFDN6O15212 AC011498.5-201ENST00000592027 486 ntBASIC17.68■□□□□ 0.42
PFDN6O15212 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms