Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AL645728.2-201ENST00000641974 660 ntBASIC24.28■■□□□ 1.48
CHD2O14647 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC24.28■■□□□ 1.48
CHD2O14647 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHD2O14647 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHD2O14647 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHD2O14647 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHD2O14647 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CHD2O14647 TDG-209ENST00000544861 1387 ntTSL 2 BASIC24.27■■□□□ 1.48
CHD2O14647 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD2O14647 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
CHD2O14647 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC24.27■■□□□ 1.48
CHD2O14647 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CHD2O14647 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC24.27■■□□□ 1.48
CHD2O14647 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC24.27■■□□□ 1.48
CHD2O14647 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CHD2O14647 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC24.27■■□□□ 1.48
CHD2O14647 PPP6R2P1-201ENST00000450880 1275 ntBASIC24.27■■□□□ 1.48
CHD2O14647 RN7SL692P-201ENST00000464677 288 ntBASIC24.27■■□□□ 1.48
CHD2O14647 AC004890.2-204ENST00000481968 304 ntBASIC24.27■■□□□ 1.48
CHD2O14647 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC24.27■■□□□ 1.48
CHD2O14647 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
CHD2O14647 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD2O14647 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CHD2O14647 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CHD2O14647 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CHD2O14647 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHD2O14647 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CHD2O14647 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHD2O14647 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC24.26■■□□□ 1.47
CHD2O14647 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC24.26■■□□□ 1.47
CHD2O14647 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC24.26■■□□□ 1.47
CHD2O14647 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHD2O14647 NOP2-220ENST00000545915 630 ntTSL 2 BASIC24.26■■□□□ 1.47
CHD2O14647 AC026150.2-201ENST00000564693 1156 ntBASIC24.26■■□□□ 1.47
CHD2O14647 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHD2O14647 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CHD2O14647 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC24.26■■□□□ 1.47
CHD2O14647 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
CHD2O14647 COQ9-214ENST00000567933 882 ntTSL 3 BASIC24.26■■□□□ 1.47
CHD2O14647 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC24.26■■□□□ 1.47
CHD2O14647 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
CHD2O14647 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHD2O14647 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHD2O14647 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC24.26■■□□□ 1.47
CHD2O14647 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC24.25■■□□□ 1.47
CHD2O14647 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD2O14647 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD2O14647 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CHD2O14647 AC097493.3-201ENST00000509725 367 ntBASIC24.25■■□□□ 1.47
CHD2O14647 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CHD2O14647 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC24.25■■□□□ 1.47
CHD2O14647 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
CHD2O14647 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
CHD2O14647 AC116407.2-201ENST00000613639 860 ntBASIC24.25■■□□□ 1.47
CHD2O14647 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD2O14647 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD2O14647 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC24.25■■□□□ 1.47
CHD2O14647 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
CHD2O14647 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CHD2O14647 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC24.24■■□□□ 1.47
CHD2O14647 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHD2O14647 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
CHD2O14647 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC24.24■■□□□ 1.47
CHD2O14647 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC24.24■■□□□ 1.47
CHD2O14647 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHD2O14647 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHD2O14647 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
CHD2O14647 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CHD2O14647 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CHD2O14647 GNAS-203ENST00000306120 1878 ntBASIC24.24■■□□□ 1.47
CHD2O14647 SLC25A24-204ENST00000569674 2357 ntBASIC24.24■■□□□ 1.47
CHD2O14647 SERBP1P5-201ENST00000510079 1181 ntBASIC24.24■■□□□ 1.47
CHD2O14647 GATD1-206ENST00000526325 756 ntTSL 5 BASIC24.24■■□□□ 1.47
CHD2O14647 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC24.24■■□□□ 1.47
CHD2O14647 AL009183.1-201ENST00000603760 355 ntBASIC24.24■■□□□ 1.47
CHD2O14647 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC24.24■■□□□ 1.47
CHD2O14647 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHD2O14647 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHD2O14647 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC24.23■■□□□ 1.47
CHD2O14647 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
CHD2O14647 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CHD2O14647 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHD2O14647 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHD2O14647 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHD2O14647 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC24.23■■□□□ 1.47
CHD2O14647 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC24.23■■□□□ 1.47
CHD2O14647 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC24.23■■□□□ 1.47
CHD2O14647 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC24.23■■□□□ 1.47
CHD2O14647 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC24.23■■□□□ 1.47
CHD2O14647 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CHD2O14647 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHD2O14647 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC24.23■■□□□ 1.47
CHD2O14647 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
CHD2O14647 MIR6080-201ENST00000617359 66 ntBASIC24.23■■□□□ 1.47
CHD2O14647 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHD2O14647 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHD2O14647 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CHD2O14647 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CHD2O14647 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CHD2O14647 SPDYE7P-202ENST00000420373 878 ntBASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms