Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP17L11C9JVI0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
USP17L11C9JVI0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 AC079781.4-201ENST00000641908 219 ntBASIC20.41■□□□□ 0.86
USP17L11C9JVI0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 AC006504.4-201ENST00000592118 1568 ntBASIC20.41■□□□□ 0.86
USP17L11C9JVI0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 AL354751.1-201ENST00000412768 1863 ntBASIC20.41■□□□□ 0.86
USP17L11C9JVI0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP17L11C9JVI0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 AC003669.1-201ENST00000334569 611 ntBASIC20.4■□□□□ 0.86
USP17L11C9JVI0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 KLF4P1-201ENST00000412782 1185 ntBASIC20.4■□□□□ 0.86
USP17L11C9JVI0 ELK2BP-201ENST00000415014 1224 ntBASIC20.4■□□□□ 0.86
USP17L11C9JVI0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 RPS8P6-201ENST00000426177 609 ntBASIC20.4■□□□□ 0.86
USP17L11C9JVI0 NCF1C-201ENST00000438382 1427 ntBASIC20.4■□□□□ 0.86
USP17L11C9JVI0 KRT18P2-201ENST00000447938 1258 ntBASIC20.4■□□□□ 0.86
USP17L11C9JVI0 AC004967.1-201ENST00000453589 447 ntBASIC20.4■□□□□ 0.86
USP17L11C9JVI0 SIGLEC30P-201ENST00000455569 941 ntBASIC20.4■□□□□ 0.86
USP17L11C9JVI0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.4■□□□□ 0.86
USP17L11C9JVI0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 AC148477.5-201ENST00000625164 1645 ntBASIC20.4■□□□□ 0.86
USP17L11C9JVI0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
USP17L11C9JVI0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
USP17L11C9JVI0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
USP17L11C9JVI0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
USP17L11C9JVI0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
USP17L11C9JVI0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
USP17L11C9JVI0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
USP17L11C9JVI0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.39■□□□□ 0.86
USP17L11C9JVI0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
USP17L11C9JVI0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.39■□□□□ 0.86
USP17L11C9JVI0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
USP17L11C9JVI0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
USP17L11C9JVI0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
USP17L11C9JVI0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
USP17L11C9JVI0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP17L11C9JVI0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
USP17L11C9JVI0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.39■□□□□ 0.85
USP17L11C9JVI0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.39■□□□□ 0.85
USP17L11C9JVI0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.39■□□□□ 0.85
USP17L11C9JVI0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.85
USP17L11C9JVI0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms