Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LINC01548A6NM66 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01548A6NM66 REXO1L6P-202ENST00000619970 1078 ntBASIC13.93□□□□□ -0.18
LINC01548A6NM66 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01548A6NM66 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
LINC01548A6NM66 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01548A6NM66 BX276092.7-203ENST00000637198 1536 ntBASIC13.93□□□□□ -0.18
LINC01548A6NM66 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01548A6NM66 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01548A6NM66 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01548A6NM66 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01548A6NM66 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01548A6NM66 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01548A6NM66 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01548A6NM66 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LINC01548A6NM66 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LINC01548A6NM66 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.93□□□□□ -0.18
LINC01548A6NM66 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
LINC01548A6NM66 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01548A6NM66 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01548A6NM66 AL049757.1-201ENST00000616842 1596 ntBASIC13.92□□□□□ -0.18
LINC01548A6NM66 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LINC01548A6NM66 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01548A6NM66 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01548A6NM66 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01548A6NM66 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01548A6NM66 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01548A6NM66 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01548A6NM66 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01548A6NM66 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LINC01548A6NM66 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01548A6NM66 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LINC01548A6NM66 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01548A6NM66 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LINC01548A6NM66 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01548A6NM66 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC01548A6NM66 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LINC01548A6NM66 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01548A6NM66 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01548A6NM66 ABCD1P5-201ENST00000445663 754 ntBASIC13.92□□□□□ -0.18
LINC01548A6NM66 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01548A6NM66 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC01548A6NM66 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC01548A6NM66 AC109462.3-201ENST00000573934 613 ntBASIC13.92□□□□□ -0.18
LINC01548A6NM66 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC01548A6NM66 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC01548A6NM66 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01548A6NM66 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01548A6NM66 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LINC01548A6NM66 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LINC01548A6NM66 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC01548A6NM66 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC01548A6NM66 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01548A6NM66 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.92□□□□□ -0.18
LINC01548A6NM66 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01548A6NM66 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LINC01548A6NM66 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LINC01548A6NM66 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC01548A6NM66 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC01548A6NM66 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01548A6NM66 AP005117.1-201ENST00000584346 1413 ntBASIC13.91□□□□□ -0.18
LINC01548A6NM66 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC01548A6NM66 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01548A6NM66 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01548A6NM66 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LINC01548A6NM66 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01548A6NM66 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01548A6NM66 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01548A6NM66 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC01548A6NM66 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.91□□□□□ -0.18
LINC01548A6NM66 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01548A6NM66 TPM4P1-201ENST00000436100 807 ntBASIC13.91□□□□□ -0.18
LINC01548A6NM66 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01548A6NM66 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.91□□□□□ -0.18
LINC01548A6NM66 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01548A6NM66 MTDHP3-201ENST00000594186 672 ntBASIC13.91□□□□□ -0.18
LINC01548A6NM66 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01548A6NM66 AC019129.2-201ENST00000609837 1235 ntBASIC13.91□□□□□ -0.18
LINC01548A6NM66 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC01548A6NM66 AL031008.1-201ENST00000619963 541 ntBASIC13.91□□□□□ -0.18
LINC01548A6NM66 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01548A6NM66 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01548A6NM66 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LINC01548A6NM66 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LINC01548A6NM66 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01548A6NM66 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01548A6NM66 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01548A6NM66 HCG11-201ENST00000411553 5696 ntBASIC13.91□□□□□ -0.18
LINC01548A6NM66 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
LINC01548A6NM66 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01548A6NM66 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
LINC01548A6NM66 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LINC01548A6NM66 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01548A6NM66 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01548A6NM66 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC01548A6NM66 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01548A6NM66 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC01548A6NM66 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC01548A6NM66 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LINC01548A6NM66 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms