Protein–RNA interactions for Protein: A5D8V6

VPS37C, Vacuolar protein sorting-associated protein 37C, humanhuman

Predicted RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37CA5D8V6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VPS37CA5D8V6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.61■□□□□ 0.89
VPS37CA5D8V6 AC092597.1-201ENST00000487352 616 ntBASIC20.61■□□□□ 0.89
VPS37CA5D8V6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.61■□□□□ 0.89
VPS37CA5D8V6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
VPS37CA5D8V6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VPS37CA5D8V6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
VPS37CA5D8V6 AC009154.2-201ENST00000621177 724 ntBASIC20.61■□□□□ 0.89
VPS37CA5D8V6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VPS37CA5D8V6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VPS37CA5D8V6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VPS37CA5D8V6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VPS37CA5D8V6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VPS37CA5D8V6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VPS37CA5D8V6 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VPS37CA5D8V6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VPS37CA5D8V6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VPS37CA5D8V6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
VPS37CA5D8V6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
VPS37CA5D8V6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
VPS37CA5D8V6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 AC112698.1-201ENST00000510299 916 ntBASIC20.6■□□□□ 0.89
VPS37CA5D8V6 AC011558.1-201ENST00000623459 338 ntBASIC20.6■□□□□ 0.89
VPS37CA5D8V6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37CA5D8V6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 NKILA-202ENST00000614771 2598 ntBASIC20.59■□□□□ 0.89
VPS37CA5D8V6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 AC011676.5-201ENST00000624864 2660 ntBASIC20.59■□□□□ 0.89
VPS37CA5D8V6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 HLA-F-220ENST00000434407 884 ntBASIC20.59■□□□□ 0.89
VPS37CA5D8V6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 AC139887.4-201ENST00000607877 719 ntBASIC20.59■□□□□ 0.89
VPS37CA5D8V6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 AL031432.5-201ENST00000641059 760 ntBASIC20.59■□□□□ 0.89
VPS37CA5D8V6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 CROCCP1-201ENST00000426910 5675 ntBASIC20.59■□□□□ 0.89
VPS37CA5D8V6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS37CA5D8V6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VPS37CA5D8V6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.58■□□□□ 0.89
VPS37CA5D8V6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.58■□□□□ 0.89
VPS37CA5D8V6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.58■□□□□ 0.89
VPS37CA5D8V6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VPS37CA5D8V6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.58■□□□□ 0.89
VPS37CA5D8V6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.58■□□□□ 0.89
VPS37CA5D8V6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VPS37CA5D8V6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VPS37CA5D8V6 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.58■□□□□ 0.89
VPS37CA5D8V6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.58■□□□□ 0.89
VPS37CA5D8V6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.58■□□□□ 0.89
VPS37CA5D8V6 AC133561.5-201ENST00000635547 218 ntBASIC20.58■□□□□ 0.89
VPS37CA5D8V6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
VPS37CA5D8V6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VPS37CA5D8V6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
VPS37CA5D8V6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
VPS37CA5D8V6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.58■□□□□ 0.88
VPS37CA5D8V6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms