Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SBNO1A3KN83 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SBNO1A3KN83 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
SBNO1A3KN83 PMS2P4-201ENST00000412466 1052 ntBASIC23.71■■□□□ 1.39
SBNO1A3KN83 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC23.71■■□□□ 1.39
SBNO1A3KN83 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SBNO1A3KN83 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC23.71■■□□□ 1.39
SBNO1A3KN83 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SBNO1A3KN83 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC23.71■■□□□ 1.39
SBNO1A3KN83 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC23.71■■□□□ 1.39
SBNO1A3KN83 AC069262.1-201ENST00000539058 672 ntBASIC23.71■■□□□ 1.39
SBNO1A3KN83 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC23.71■■□□□ 1.39
SBNO1A3KN83 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC23.71■■□□□ 1.39
SBNO1A3KN83 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC23.71■■□□□ 1.39
SBNO1A3KN83 AF228730.6-201ENST00000641497 218 ntBASIC23.71■■□□□ 1.39
SBNO1A3KN83 AC084121.3-201ENST00000641716 218 ntBASIC23.71■■□□□ 1.39
SBNO1A3KN83 AC105233.6-201ENST00000642093 218 ntBASIC23.71■■□□□ 1.39
SBNO1A3KN83 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SBNO1A3KN83 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC23.71■■□□□ 1.39
SBNO1A3KN83 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC23.71■■□□□ 1.39
SBNO1A3KN83 AC100803.2-201ENST00000562459 1963 ntBASIC23.71■■□□□ 1.39
SBNO1A3KN83 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC23.71■■□□□ 1.39
SBNO1A3KN83 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC23.71■■□□□ 1.39
SBNO1A3KN83 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
SBNO1A3KN83 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SBNO1A3KN83 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SBNO1A3KN83 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SBNO1A3KN83 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SBNO1A3KN83 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SBNO1A3KN83 AL355306.1-201ENST00000415580 579 ntBASIC23.7■■□□□ 1.38
SBNO1A3KN83 RNA5SP421-201ENST00000516864 134 ntBASIC23.7■■□□□ 1.38
SBNO1A3KN83 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC23.7■■□□□ 1.38
SBNO1A3KN83 AC099522.2-201ENST00000607001 744 ntBASIC23.7■■□□□ 1.38
SBNO1A3KN83 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
SBNO1A3KN83 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
SBNO1A3KN83 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SBNO1A3KN83 BX323043.1-201ENST00000641006 1765 ntBASIC23.7■■□□□ 1.38
SBNO1A3KN83 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
SBNO1A3KN83 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SBNO1A3KN83 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
SBNO1A3KN83 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SBNO1A3KN83 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SBNO1A3KN83 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC23.69■■□□□ 1.38
SBNO1A3KN83 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SBNO1A3KN83 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SBNO1A3KN83 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SBNO1A3KN83 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SBNO1A3KN83 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SBNO1A3KN83 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SBNO1A3KN83 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
SBNO1A3KN83 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
SBNO1A3KN83 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC23.69■■□□□ 1.38
SBNO1A3KN83 RPL28-209ENST00000560055 670 ntTSL 3 BASIC23.69■■□□□ 1.38
SBNO1A3KN83 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC23.69■■□□□ 1.38
SBNO1A3KN83 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
SBNO1A3KN83 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SBNO1A3KN83 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
SBNO1A3KN83 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
SBNO1A3KN83 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC23.69■■□□□ 1.38
SBNO1A3KN83 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SBNO1A3KN83 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SBNO1A3KN83 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SBNO1A3KN83 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SBNO1A3KN83 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SBNO1A3KN83 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC23.69■■□□□ 1.38
SBNO1A3KN83 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SBNO1A3KN83 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SBNO1A3KN83 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC23.68■■□□□ 1.38
SBNO1A3KN83 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC23.68■■□□□ 1.38
SBNO1A3KN83 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC23.68■■□□□ 1.38
SBNO1A3KN83 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SBNO1A3KN83 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC23.68■■□□□ 1.38
SBNO1A3KN83 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC23.68■■□□□ 1.38
SBNO1A3KN83 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SBNO1A3KN83 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SBNO1A3KN83 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SBNO1A3KN83 AC051619.7-201ENST00000568314 623 ntBASIC23.68■■□□□ 1.38
SBNO1A3KN83 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SBNO1A3KN83 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SBNO1A3KN83 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SBNO1A3KN83 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SBNO1A3KN83 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC23.68■■□□□ 1.38
SBNO1A3KN83 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SBNO1A3KN83 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC23.68■■□□□ 1.38
SBNO1A3KN83 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SBNO1A3KN83 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SBNO1A3KN83 USP49-202ENST00000373010 2446 ntTSL 5 BASIC23.68■■□□□ 1.38
SBNO1A3KN83 EFTUD1P1-204ENST00000560401 1798 ntBASIC23.68■■□□□ 1.38
SBNO1A3KN83 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SBNO1A3KN83 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SBNO1A3KN83 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SBNO1A3KN83 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SBNO1A3KN83 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC23.68■■□□□ 1.38
SBNO1A3KN83 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
SBNO1A3KN83 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC23.67■■□□□ 1.38
SBNO1A3KN83 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SBNO1A3KN83 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SBNO1A3KN83 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
SBNO1A3KN83 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SBNO1A3KN83 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms