Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 SLC25A1P2-201ENST00000430693 912 ntBASIC19.17■□□□□ 0.66
CCDC66A2RUB6 KRT18P23-201ENST00000435622 1283 ntBASIC19.17■□□□□ 0.66
CCDC66A2RUB6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 AL023803.3-201ENST00000615559 522 ntBASIC19.17■□□□□ 0.66
CCDC66A2RUB6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC66A2RUB6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 AL023806.1-201ENST00000603994 1649 ntBASIC19.16■□□□□ 0.66
CCDC66A2RUB6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 TSPY17P-201ENST00000450329 467 ntBASIC19.16■□□□□ 0.66
CCDC66A2RUB6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 WWOX-216ENST00000569818 525 ntBASIC19.16■□□□□ 0.66
CCDC66A2RUB6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC66A2RUB6 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 AC093010.1-201ENST00000473625 1624 ntBASIC19.15■□□□□ 0.66
CCDC66A2RUB6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 AP003041.3-201ENST00000527151 707 ntBASIC19.15■□□□□ 0.66
CCDC66A2RUB6 AC009065.1-201ENST00000564055 1225 ntBASIC19.15■□□□□ 0.66
CCDC66A2RUB6 AL353719.1-201ENST00000566847 864 ntBASIC19.15■□□□□ 0.66
CCDC66A2RUB6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 AP006294.2-201ENST00000641667 209 ntBASIC19.15■□□□□ 0.66
CCDC66A2RUB6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC66A2RUB6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC66A2RUB6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 AC093827.2-201ENST00000512654 315 ntBASIC19.14■□□□□ 0.65
CCDC66A2RUB6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms