Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 FAM197Y1-201ENST00000421178 764 ntBASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.53■□□□□ 0.24
TCRBV3S1A0A5B6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 BX276092.7-203ENST00000637198 1536 ntBASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.52■□□□□ 0.24
TCRBV3S1A0A5B6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.52■□□□□ 0.23
TCRBV3S1A0A5B6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TCRBV3S1A0A5B6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TCRBV3S1A0A5B6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.52■□□□□ 0.23
TCRBV3S1A0A5B6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
TCRBV3S1A0A5B6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TCRBV3S1A0A5B6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TCRBV3S1A0A5B6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TCRBV3S1A0A5B6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TCRBV3S1A0A5B6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TCRBV3S1A0A5B6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.52■□□□□ 0.23
TCRBV3S1A0A5B6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TCRBV3S1A0A5B6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TCRBV3S1A0A5B6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 AL139327.4-201ENST00000612362 153 ntBASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 KRT8P9-201ENST00000558927 1449 ntBASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV3S1A0A5B6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms