Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
BIVM-ERCC5R4GMW8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
BIVM-ERCC5R4GMW8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC29.11■■■□□ 2.25
BIVM-ERCC5R4GMW8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC29.11■■■□□ 2.25
BIVM-ERCC5R4GMW8 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
BIVM-ERCC5R4GMW8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
BIVM-ERCC5R4GMW8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC29.11■■■□□ 2.25
BIVM-ERCC5R4GMW8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC29.11■■■□□ 2.25
BIVM-ERCC5R4GMW8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
BIVM-ERCC5R4GMW8 REXO1L3P-201ENST00000622202 1288 ntBASIC29.11■■■□□ 2.25
BIVM-ERCC5R4GMW8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC29.11■■■□□ 2.25
BIVM-ERCC5R4GMW8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC29.11■■■□□ 2.25
BIVM-ERCC5R4GMW8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC29.11■■■□□ 2.25
BIVM-ERCC5R4GMW8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC29.1■■■□□ 2.25
BIVM-ERCC5R4GMW8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
BIVM-ERCC5R4GMW8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
BIVM-ERCC5R4GMW8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
BIVM-ERCC5R4GMW8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC29.1■■■□□ 2.25
BIVM-ERCC5R4GMW8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC29.1■■■□□ 2.25
BIVM-ERCC5R4GMW8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC29.1■■■□□ 2.25
BIVM-ERCC5R4GMW8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
BIVM-ERCC5R4GMW8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC29.1■■■□□ 2.25
BIVM-ERCC5R4GMW8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC29.1■■■□□ 2.25
BIVM-ERCC5R4GMW8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
BIVM-ERCC5R4GMW8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
BIVM-ERCC5R4GMW8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC29.1■■■□□ 2.25
BIVM-ERCC5R4GMW8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC29.1■■■□□ 2.25
BIVM-ERCC5R4GMW8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
BIVM-ERCC5R4GMW8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
BIVM-ERCC5R4GMW8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC29.09■■■□□ 2.25
BIVM-ERCC5R4GMW8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC29.09■■■□□ 2.25
BIVM-ERCC5R4GMW8 WDR53-203ENST00000429115 683 ntTSL 2 BASIC29.09■■■□□ 2.25
BIVM-ERCC5R4GMW8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC29.09■■■□□ 2.25
BIVM-ERCC5R4GMW8 KRT8P48-201ENST00000515599 1220 ntBASIC29.09■■■□□ 2.25
BIVM-ERCC5R4GMW8 AC093503.3-201ENST00000624917 2352 ntBASIC29.09■■■□□ 2.25
BIVM-ERCC5R4GMW8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
BIVM-ERCC5R4GMW8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC29.09■■■□□ 2.25
BIVM-ERCC5R4GMW8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
BIVM-ERCC5R4GMW8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC29.09■■■□□ 2.25
BIVM-ERCC5R4GMW8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
BIVM-ERCC5R4GMW8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC29.09■■■□□ 2.25
BIVM-ERCC5R4GMW8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
BIVM-ERCC5R4GMW8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC29.09■■■□□ 2.25
BIVM-ERCC5R4GMW8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
BIVM-ERCC5R4GMW8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
BIVM-ERCC5R4GMW8 LINC00304-203ENST00000565008 1864 ntBASIC29.08■■■□□ 2.25
BIVM-ERCC5R4GMW8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
BIVM-ERCC5R4GMW8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
BIVM-ERCC5R4GMW8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC29.08■■■□□ 2.25
BIVM-ERCC5R4GMW8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
BIVM-ERCC5R4GMW8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC29.08■■■□□ 2.25
BIVM-ERCC5R4GMW8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
BIVM-ERCC5R4GMW8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
BIVM-ERCC5R4GMW8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
BIVM-ERCC5R4GMW8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
BIVM-ERCC5R4GMW8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC29.08■■■□□ 2.25
BIVM-ERCC5R4GMW8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC29.08■■■□□ 2.25
BIVM-ERCC5R4GMW8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
BIVM-ERCC5R4GMW8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC29.08■■■□□ 2.25
BIVM-ERCC5R4GMW8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
BIVM-ERCC5R4GMW8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
BIVM-ERCC5R4GMW8 AL390955.2-201ENST00000603032 514 ntBASIC29.08■■■□□ 2.25
BIVM-ERCC5R4GMW8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC29.08■■■□□ 2.25
BIVM-ERCC5R4GMW8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC29.07■■■□□ 2.24
BIVM-ERCC5R4GMW8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC29.07■■■□□ 2.24
BIVM-ERCC5R4GMW8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
BIVM-ERCC5R4GMW8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
BIVM-ERCC5R4GMW8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC29.07■■■□□ 2.24
BIVM-ERCC5R4GMW8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
BIVM-ERCC5R4GMW8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
BIVM-ERCC5R4GMW8 FAM185BP-201ENST00000443595 716 ntBASIC29.07■■■□□ 2.24
BIVM-ERCC5R4GMW8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
BIVM-ERCC5R4GMW8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC29.07■■■□□ 2.24
BIVM-ERCC5R4GMW8 CFL1-212ENST00000531413 636 ntTSL 3 BASIC29.07■■■□□ 2.24
BIVM-ERCC5R4GMW8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC29.07■■■□□ 2.24
BIVM-ERCC5R4GMW8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
BIVM-ERCC5R4GMW8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC29.07■■■□□ 2.24
BIVM-ERCC5R4GMW8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC29.07■■■□□ 2.24
BIVM-ERCC5R4GMW8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC29.07■■■□□ 2.24
BIVM-ERCC5R4GMW8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
BIVM-ERCC5R4GMW8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC29.07■■■□□ 2.24
BIVM-ERCC5R4GMW8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
BIVM-ERCC5R4GMW8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC29.06■■■□□ 2.24
BIVM-ERCC5R4GMW8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC29.06■■■□□ 2.24
BIVM-ERCC5R4GMW8 LHX6-205ENST00000464484 666 ntTSL 2 BASIC29.06■■■□□ 2.24
BIVM-ERCC5R4GMW8 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC29.06■■■□□ 2.24
BIVM-ERCC5R4GMW8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
BIVM-ERCC5R4GMW8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC29.06■■■□□ 2.24
BIVM-ERCC5R4GMW8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC29.06■■■□□ 2.24
BIVM-ERCC5R4GMW8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC29.06■■■□□ 2.24
BIVM-ERCC5R4GMW8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC29.06■■■□□ 2.24
BIVM-ERCC5R4GMW8 AC129492.6-201ENST00000611383 1305 ntBASIC29.06■■■□□ 2.24
BIVM-ERCC5R4GMW8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC29.06■■■□□ 2.24
BIVM-ERCC5R4GMW8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC29.06■■■□□ 2.24
BIVM-ERCC5R4GMW8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC29.06■■■□□ 2.24
BIVM-ERCC5R4GMW8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
BIVM-ERCC5R4GMW8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC29.06■■■□□ 2.24
BIVM-ERCC5R4GMW8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC29.05■■■□□ 2.24
BIVM-ERCC5R4GMW8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
BIVM-ERCC5R4GMW8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms