Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
GPC6Q9Y625 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.77■□□□□ 0.28
GPC6Q9Y625 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
GPC6Q9Y625 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.77■□□□□ 0.27
GPC6Q9Y625 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
GPC6Q9Y625 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GPC6Q9Y625 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
GPC6Q9Y625 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
GPC6Q9Y625 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GPC6Q9Y625 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.77■□□□□ 0.27
GPC6Q9Y625 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.77■□□□□ 0.27
GPC6Q9Y625 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
GPC6Q9Y625 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GPC6Q9Y625 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
GPC6Q9Y625 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GPC6Q9Y625 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC6Q9Y625 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
GPC6Q9Y625 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
GPC6Q9Y625 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC6Q9Y625 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC6Q9Y625 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
GPC6Q9Y625 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC6Q9Y625 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC6Q9Y625 CROCCP1-201ENST00000426910 5675 ntBASIC16.76■□□□□ 0.27
GPC6Q9Y625 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC6Q9Y625 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.76■□□□□ 0.27
GPC6Q9Y625 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
GPC6Q9Y625 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC6Q9Y625 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC6Q9Y625 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC6Q9Y625 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.76■□□□□ 0.27
GPC6Q9Y625 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC6Q9Y625 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.76■□□□□ 0.27
GPC6Q9Y625 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.76■□□□□ 0.27
GPC6Q9Y625 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
GPC6Q9Y625 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
GPC6Q9Y625 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC6Q9Y625 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.76■□□□□ 0.27
GPC6Q9Y625 MIR3917-201ENST00000580971 93 ntBASIC16.76■□□□□ 0.27
GPC6Q9Y625 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.76■□□□□ 0.27
GPC6Q9Y625 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
GPC6Q9Y625 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC6Q9Y625 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC6Q9Y625 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC6Q9Y625 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC6Q9Y625 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC6Q9Y625 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.76■□□□□ 0.27
GPC6Q9Y625 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GPC6Q9Y625 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.76■□□□□ 0.27
GPC6Q9Y625 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC6Q9Y625 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
GPC6Q9Y625 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
GPC6Q9Y625 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
GPC6Q9Y625 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
GPC6Q9Y625 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
GPC6Q9Y625 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
GPC6Q9Y625 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.75■□□□□ 0.27
GPC6Q9Y625 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
GPC6Q9Y625 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
GPC6Q9Y625 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.75■□□□□ 0.27
GPC6Q9Y625 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.75■□□□□ 0.27
GPC6Q9Y625 AC034232.1-201ENST00000506026 1064 ntBASIC16.75■□□□□ 0.27
GPC6Q9Y625 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.75■□□□□ 0.27
GPC6Q9Y625 AL023973.1-201ENST00000624619 620 ntBASIC16.75■□□□□ 0.27
GPC6Q9Y625 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.75■□□□□ 0.27
GPC6Q9Y625 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
GPC6Q9Y625 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.75■□□□□ 0.27
GPC6Q9Y625 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
GPC6Q9Y625 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
GPC6Q9Y625 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC6Q9Y625 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC6Q9Y625 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.74■□□□□ 0.27
GPC6Q9Y625 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC6Q9Y625 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC6Q9Y625 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC6Q9Y625 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC6Q9Y625 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms