Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 COX20-201ENST00000366528 568 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 AC007322.4-201ENST00000509611 723 ntBASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 AC131281.2-201ENST00000520478 145 ntBASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 AC010536.3-201ENST00000620306 533 ntBASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAPPC1Q9Y5R8 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
TRAPPC1Q9Y5R8 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.27
TRAPPC1Q9Y5R8 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
TRAPPC1Q9Y5R8 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
TRAPPC1Q9Y5R8 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 AL355472.2-201ENST00000422958 438 ntBASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms