Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 SDHAP2-201ENST00000455183 2001 ntBASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 MYLKP1-201ENST00000509077 1580 ntBASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 PRORSD1P-202ENST00000563365 2154 ntBASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 AC008764.6-201ENST00000595909 2069 ntBASIC17.19■□□□□ 0.34
PCDHGA3Q9Y5H0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 AL024508.2-201ENST00000607749 1894 ntBASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 FGFR3P6-201ENST00000457012 610 ntBASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 RNPS1P1-201ENST00000507437 918 ntBASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA3Q9Y5H0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms