Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 AL139384.1-201ENST00000612143 3047 ntBASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 UPF3AP3-201ENST00000420996 769 ntBASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 AC107918.4-202ENST00000641623 219 ntBASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA9Q9Y5G4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 AC008764.6-201ENST00000595909 2069 ntBASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 AC073592.3-201ENST00000625118 1834 ntBASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 KRT18P3-201ENST00000451602 1288 ntBASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 AC112698.1-201ENST00000510299 916 ntBASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 RNA5SP415-201ENST00000517246 115 ntBASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 AC105339.3-201ENST00000560043 636 ntBASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 AL691403.2-201ENST00000618460 490 ntBASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA9Q9Y5G4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 AC011270.2-201ENST00000624293 2550 ntBASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 LAGE3P1-201ENST00000425356 484 ntBASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 DNAJB3-201ENST00000446806 729 ntBASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms