Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 AL592071.1-201ENST00000611956 408 ntBASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 AC009102.3-201ENST00000623118 1491 ntBASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 AL645608.8-201ENST00000606034 2086 ntBASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGB6Q9Y5F9 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB6Q9Y5F9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms