Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PCDHB2Q9Y5E7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHB2Q9Y5E7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHB2Q9Y5E7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
PCDHB2Q9Y5E7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHB2Q9Y5E7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHB2Q9Y5E7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
PCDHB2Q9Y5E7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB2Q9Y5E7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHB2Q9Y5E7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB2Q9Y5E7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
PCDHB2Q9Y5E7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
PCDHB2Q9Y5E7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB2Q9Y5E7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.33■□□□□ 0.69
PCDHB2Q9Y5E7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB2Q9Y5E7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PCDHB2Q9Y5E7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB2Q9Y5E7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.33■□□□□ 0.69
PCDHB2Q9Y5E7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
PCDHB2Q9Y5E7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.33■□□□□ 0.68
PCDHB2Q9Y5E7 AC139887.3-201ENST00000568585 713 ntBASIC19.33■□□□□ 0.68
PCDHB2Q9Y5E7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.33■□□□□ 0.68
PCDHB2Q9Y5E7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PCDHB2Q9Y5E7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB2Q9Y5E7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB2Q9Y5E7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
PCDHB2Q9Y5E7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB2Q9Y5E7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
PCDHB2Q9Y5E7 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.33■□□□□ 0.68
PCDHB2Q9Y5E7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB2Q9Y5E7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDHB2Q9Y5E7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB2Q9Y5E7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDHB2Q9Y5E7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB2Q9Y5E7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 RPS2P28-201ENST00000314255 741 ntBASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 RPS2P1-201ENST00000434010 821 ntBASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 AC122714.2-201ENST00000502787 707 ntBASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 NKAPP1-205ENST00000585790 367 ntBASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 AL671883.3-201ENST00000603274 991 ntBASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 AL139288.1-201ENST00000623748 933 ntBASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB2Q9Y5E7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB2Q9Y5E7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHB2Q9Y5E7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB2Q9Y5E7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PCDHB2Q9Y5E7 KRT18P55-202ENST00000578578 1546 ntBASIC19.31■□□□□ 0.68
PCDHB2Q9Y5E7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PCDHB2Q9Y5E7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHB2Q9Y5E7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB2Q9Y5E7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB2Q9Y5E7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB2Q9Y5E7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB2Q9Y5E7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.31■□□□□ 0.68
PCDHB2Q9Y5E7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB2Q9Y5E7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB2Q9Y5E7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB2Q9Y5E7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB2Q9Y5E7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB2Q9Y5E7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PCDHB2Q9Y5E7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms