Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.76■□□□□ 0.43
PKP3Q9Y446 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP3Q9Y446 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.76■□□□□ 0.43
PKP3Q9Y446 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.76■□□□□ 0.43
PKP3Q9Y446 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PKP3Q9Y446 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PKP3Q9Y446 MIR3180-1-201ENST00000580374 94 ntBASIC17.76■□□□□ 0.43
PKP3Q9Y446 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.76■□□□□ 0.43
PKP3Q9Y446 MIR3180-3-201ENST00000584616 94 ntBASIC17.76■□□□□ 0.43
PKP3Q9Y446 AC005336.2-201ENST00000593183 939 ntBASIC17.76■□□□□ 0.43
PKP3Q9Y446 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.76■□□□□ 0.43
PKP3Q9Y446 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
PKP3Q9Y446 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP3Q9Y446 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.76■□□□□ 0.43
PKP3Q9Y446 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP3Q9Y446 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP3Q9Y446 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
PKP3Q9Y446 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.76■□□□□ 0.43
PKP3Q9Y446 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.76■□□□□ 0.43
PKP3Q9Y446 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PKP3Q9Y446 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP3Q9Y446 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP3Q9Y446 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PKP3Q9Y446 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP3Q9Y446 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP3Q9Y446 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PKP3Q9Y446 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PKP3Q9Y446 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PKP3Q9Y446 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.75■□□□□ 0.43
PKP3Q9Y446 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PKP3Q9Y446 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP3Q9Y446 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.75■□□□□ 0.43
PKP3Q9Y446 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP3Q9Y446 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.75■□□□□ 0.43
PKP3Q9Y446 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PKP3Q9Y446 KRT17P6-201ENST00000453795 1220 ntBASIC17.75■□□□□ 0.43
PKP3Q9Y446 AP000867.3-201ENST00000524675 377 ntBASIC17.75■□□□□ 0.43
PKP3Q9Y446 AC009533.2-201ENST00000543664 586 ntBASIC17.75■□□□□ 0.43
PKP3Q9Y446 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.75■□□□□ 0.43
PKP3Q9Y446 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.75■□□□□ 0.43
PKP3Q9Y446 AL138831.2-201ENST00000606564 490 ntBASIC17.75■□□□□ 0.43
PKP3Q9Y446 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PKP3Q9Y446 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP3Q9Y446 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PKP3Q9Y446 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PKP3Q9Y446 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
PKP3Q9Y446 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP3Q9Y446 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.75■□□□□ 0.43
PKP3Q9Y446 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PKP3Q9Y446 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP3Q9Y446 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP3Q9Y446 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP3Q9Y446 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PKP3Q9Y446 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PKP3Q9Y446 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PKP3Q9Y446 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP3Q9Y446 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP3Q9Y446 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP3Q9Y446 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP3Q9Y446 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PKP3Q9Y446 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PKP3Q9Y446 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.74■□□□□ 0.43
PKP3Q9Y446 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.74■□□□□ 0.43
PKP3Q9Y446 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP3Q9Y446 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP3Q9Y446 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP3Q9Y446 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP3Q9Y446 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PKP3Q9Y446 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PKP3Q9Y446 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PKP3Q9Y446 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PKP3Q9Y446 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PKP3Q9Y446 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PKP3Q9Y446 AC104819.1-201ENST00000504587 486 ntBASIC17.74■□□□□ 0.43
PKP3Q9Y446 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.74■□□□□ 0.43
PKP3Q9Y446 AC074051.2-201ENST00000565115 352 ntBASIC17.74■□□□□ 0.43
PKP3Q9Y446 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PKP3Q9Y446 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PKP3Q9Y446 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.74■□□□□ 0.43
PKP3Q9Y446 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.74■□□□□ 0.43
PKP3Q9Y446 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.74■□□□□ 0.43
PKP3Q9Y446 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PKP3Q9Y446 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP3Q9Y446 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP3Q9Y446 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.74■□□□□ 0.43
PKP3Q9Y446 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PKP3Q9Y446 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP3Q9Y446 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP3Q9Y446 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.73■□□□□ 0.43
PKP3Q9Y446 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKP3Q9Y446 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PKP3Q9Y446 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PKP3Q9Y446 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.73■□□□□ 0.43
PKP3Q9Y446 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
PKP3Q9Y446 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKP3Q9Y446 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.73■□□□□ 0.43
PKP3Q9Y446 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.73■□□□□ 0.43
PKP3Q9Y446 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKP3Q9Y446 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKP3Q9Y446 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms